(used for mutation description)
(last modified July 19, 2009)
This file was created to facilitate the description of sequence variants in the LAMA2 gene based on a coding DNA reference sequence following the HGVS recommendations. The sequence was taken from NG_008678.1, covering transcript variant 1 (NM_000426.3). Exon 53 is alternatively spliced (NM_001079823.1) and Pegoraro (2000) described a transcript missing most of exon 32 (~10% of the transcripts).
NOTE: exon numbering differs from that originally reported by Zhang et al. (1996); their exon 5 sequence actually covers 2 exons. The total numer of LAMA2-exons is thus 65 (not 64).
Please note that introns are available by clicking on the exon numbers above the sequence.
(upstream sequence)
. . . . g.5045
ttccccagcagctgctgctcgctcagctcacaagccaaggccagg c.-61
. . . . . . g.5105
ggacagggcggcagcgactcctctggctcccgagaagtggatccggtcgcggccactacg c.-1
. . . . . . g.5165
ATGCCGGGAGCCGCCGGGGTCCTCCTCCTTCTGCTGCTCTCCGGAGGCCTCGGGGGCGTA c.60
M P G A A G V L L L L L L S G G L G G V p.20
. . . . . | 02 . g.171785
CAGGCGCAGCGGCCGCAGCAGCAGCGGCAGTCACAGGCACATCAGCAAAGAG | GTTTATTC c.120
Q A Q R P Q Q Q R Q S Q A H Q Q R G | L F p.40
. . . . . . g.171845
CCTGCTGTCCTGAATCTTGCTTCTAATGCTCTTATCACGACCAATGCAACATGTGGAGAA c.180
P A V L N L A S N A L I T T N A T C G E p.60
. . . . . . g.171905
AAAGGACCTGAAATGTACTGCAAATTGGTAGAACATGTCCCTGGGCAGCCTGTGAGGAAC c.240
K G P E M Y C K L V E H V P G Q P V R N p.80
. . . . | 03 . . g.181660
CCGCAGTGTCGAATCTGCAATCAAAACAGCAGCAATCCAAACC | AGAGACACCCGATTACA c.300
P Q C R I C N Q N S S N P N Q | R H P I T p.100
. . . . . . g.181720
AATGCTATTGATGGAAAGAACACTTGGTGGCAGAGTCCCAGTATTAAGAATGGAATCGAA c.360
N A I D G K N T W W Q S P S I K N G I E p.120
. . . | 04 . . . g.220056
TACCATTATGTGACAATTACCCTGGATTTACAGCAG | GTGTTCCAGATCGCGTATGTGATT c.420
Y H Y V T I T L D L Q Q | V F Q I A Y V I p.140
. . . . . . g.220116
GTGAAGGCAGCTAACTCCCCCCGGCCTGGAAACTGGATTTTGGAACGCTCTCTTGATGAT c.480
V K A A N S P R P G N W I L E R S L D D p.160
. . . . . . g.220176
GTTGAATACAAGCCCTGGCAGTATCATGCTGTGACAGACACGGAGTGCCTAACGCTTTAC c.540
V E Y K P W Q Y H A V T D T E C L T L Y p.180
. . . . . . g.220236
AATATTTATCCCCGCACTGGGCCACCGTCATATGCCAAAGATGATGAGGTCATCTGCACT c.600
N I Y P R T G P P S Y A K D D E V I C T p.200
. . . | 05 . . g.265781
TCATTTTACTCCAAGATACACCCCTTAGAAAATGGAGAG | ATTCACATCTCTTTAATCAAT c.660
S F Y S K I H P L E N G E | I H I S L I N p.220
. . . . . . g.265841
GGGAGACCAAGTGCCGATGATCCTTCTCCAGAACTGCTAGAATTTACCTCCGCTCGCTAT c.720
G R P S A D D P S P E L L E F T S A R Y p.240
. . . . . . g.265901
ATTCGCCTGAGATTTCAGAGGATCCGCACACTGAATGCTGACTTGATGATGTTTGCTCAC c.780
I R L R F Q R I R T L N A D L M M F A H p.260
. . . | 06 . . g.268839
AAAGACCCAAGAGAAATTGACCCCATTGTCACCAGAAGA | TATTACTACTCGGTCAAGGAT c.840
K D P R E I D P I V T R R | Y Y Y S V K D p.280
. . . . . . g.268899
ATTTCAGTTGGAGGGATGTGCATCTGCTATGGTCATGCCAGGGCTTGTCCACTTGATCCA c.900
I S V G G M C I C Y G H A R A C P L D P p.300
| 07 . . . . . g.270889
GCGACAAAT | AAATCTCGCTGTGAGTGTGAGCATAACACATGTGGCGATAGCTGTGATCAG c.960
A T N | K S R C E C E H N T C G D S C D Q p.320
. . . . . . g.270949
TGCTGTCCAGGATTCCATCAGAAACCCTGGAGAGCTGGAACTTTTCTAACTAAAACTGAA c.1020
C C P G F H Q K P W R A G T F L T K T E p.340
| 08. . . . . . g.276417
TGTGAAG | CATGCAATTGTCATGGAAAAGCTGAAGAATGCTATTATGATGAAAATGTTGCC c.1080
C E A | C N C H G K A E E C Y Y D E N V A p.360
. . . . . . g.276477
AGAAGAAATCTGAGTTTGAATATACGTGGAAAGTACATTGGAGGGGGTGTCTGCATTAAT c.1140
R R N L S L N I R G K Y I G G G V C I N p.380
. . . . . . g.276537
TGTACCCAAAACACTGCTGGTATAAACTGCGAGACATGTACTGATGGCTTCTTCAGACCC c.1200
C T Q N T A G I N C E T C T D G F F R P p.400
| 09 . . . . . . g.287489
AAAGGG | GTATCTCCAAATTATCCAAGGCCATGCCAGCCATGTCATTGCGATCCAATTGGT c.1260
K G | V S P N Y P R P C Q P C H C D P I G p.420
. . . . | 10 . . g.299579
TCCTTAAATGAAGTCTGTGTCAAGGATGAGAAACATGCTCGACGAG | GTTTGGCACCTGGA c.1320
S L N E V C V K D E K H A R R G | L A P G p.440
. . . . . . g.299639
TCCTGTCATTGCAAAACTGGTTTTGGAGGTGTGAGCTGTGATCGGTGTGCCAGGGGCTAC c.1380
S C H C K T G F G G V S C D R C A R G Y p.460
. . . . . . g.299699
ACTGGCTACCCGGACTGCAAAGCCTGTAACTGCAGTGGGTTAGGGAGCAAAAATGAGGAT c.1440
T G Y P D C K A C N C S G L G S K N E D p.480
. . | 11. . . . g.312097
CCTTGTTTTGGCCCCTGTATCTGCAAG | GAAAATGTTGAAGGAGGAGACTGTAGTCGTTGC c.1500
P C F G P C I C K | E N V E G G D C S R C p.500
. . . . . . g.312157
AAATCCGGCTTCTTCAATTTGCAAGAGGATAATTGGAAAGGCTGCGATGAGTGTTTCTGT c.1560
K S G F F N L Q E D N W K G C D E C F C p.520
. . . . | 12 . g.314551
TCAGGGGTTTCAAACAGATGTCAGAGTTCCTACTGGACCTATGGCAAA | ATACAAGATATG c.1620
S G V S N R C Q S S Y W T Y G K | I Q D M p.540
. . . . . . g.314611
AGTGGCTGGTATCTGACTGACCTTCCTGGCCGCATTCGAGTGGCTCCCCAGCAGGACGAC c.1680
S G W Y L T D L P G R I R V A P Q Q D D p.560
. . . . . . g.314671
TTGGACTCACCTCAGCAGATCAGCATCAGTAACGCGGAGGCCCGGCAAGCCCTGCCGCAC c.1740
L D S P Q Q I S I S N A E A R Q A L P H p.580
. . . . | 13 . . g.371989
AGCTACTACTGGAGCGCGCCGGCTCCCTATCTGGGAAACAAA | CTCCCAGCAGTAGGAGGA c.1800
S Y Y W S A P A P Y L G N K | L P A V G G p.600
. . . . . . g.372049
CAGTTGACATTTACCATATCATATGACCTTGAAGAAGAGGAAGAAGATACAGAACGTGTT c.1860
Q L T F T I S Y D L E E E E E D T E R V p.620
. . | 14 . . . . g.373979
CTCCAGCTTATGATTATCTTAGAG | GGTAATGACTTGAGCATCAGCACAGCCCAAGATGAG c.1920
L Q L M I I L E | G N D L S I S T A Q D E p.640
. . . . . . g.374039
GTGTACCTGCACCCATCTGAAGAACATACTAATGTATTGTTACTTAAAGAAGAATCATTT c.1980
V Y L H P S E E H T N V L L L K E E S F p.660
. . . . . . g.374099
ACCATACATGGCACACATTTTCCAGTCCGTAGAAAGGAATTTATGACAGTGCTTGCGAAT c.2040
T I H G T H F P V R R K E F M T V L A N p.680
. . . . . | 15 . g.382574
TTGAAGAGAGTCCTCCTACAAATCACATACAGCTTTGGGATGGATGCCATCTTCAG | GTTG c.2100
L K R V L L Q I T Y S F G M D A I F R | L p.700
. . . . . . g.382634
AGCTCTGTTAACCTTGAATCCGCTGTCTCCTATCCTACTGATGGAAGCATTGCAGCAGCT c.2160
S S V N L E S A V S Y P T D G S I A A A p.720
. . . . | 16 . g.388977
GTAGAAGTGTGTCAGTGCCCACCAGGGTATACTGGCTCCTCTTGTGAA | TCTTGTTGGCCT c.2220
V E V C Q C P P G Y T G S S C E | S C W P p.740
. . . . . . g.389037
AGGCACAGGCGAGTTAACGGCACTATTTTTGGTGGCATCTGTGAGCCATGTCAGTGCTTT c.2280
R H R R V N G T I F G G I C E P C Q C F p.760
. . . . | 17 . . g.392501
GGTCATGCGGAGTCCTGTGATGACGTCACTGGAGAATGCCTG | AACTGTAAGGATCACACA c.2340
G H A E S C D D V T G E C L | N C K D H T p.780
. . . . . . g.392561
GGTGGCCCATATTGTGATAAATGTCTTCCTGGTTTCTATGGCGAGCCTACTAAAGGAACC c.2400
G G P Y C D K C L P G F Y G E P T K G T p.800
. . . . . | 18 . g.401930
TCTGAAGACTGTCAACCCTGTGCCTGTCCACTCAATATCCCATCCAATAA | CTTTAGCCCA c.2460
S E D C Q P C A C P L N I P S N N | F S P p.820
. . . . . . g.401990
ACGTGCCATTTAGACCGGAGTCTTGGATTGATCTGTGATGGATGCCCTGTCGGGTACACA c.2520
T C H L D R S L G L I C D G C P V G Y T p.840
. | 19. . . . . g.409749
GGACCACGCTGTGAGAG | GTGTGCAGAAGGCTATTTTGGACAACCCTCTGTACCTGGAGGA c.2580
G P R C E R | C A E G Y F G Q P S V P G G p.860
. . . . . . g.409809
TCATGTCAGCCATGCCAATGCAATGACAACCTTGACTTCTCCATCCCTGGCAGCTGTGAC c.2640
S C Q P C Q C N D N L D F S I P G S C D p.880
. . . . . . g.409869
AGCTTGTCTGGCTCCTGTCTGATATGTAAACCAGGTACAACAGGCCGGTACTGTGAGCTC c.2700
S L S G S C L I C K P G T T G R Y C E L p.900
. . . . | 20 . g.413484
TGTGCTGATGGATATTTTGGAGATGCAGTTGATGCGAAGAACTGTCAGC | CCTGTCGCTGT c.2760
C A D G Y F G D A V D A K N C Q P | C R C p.920
. . . . . . g.413544
AATGCCGGTGGCTCTTTCTCTGAGGTTTGCCACAGTCAAACTGGACAGTGTGAGTGCAGA c.2820
N A G G S F S E V C H S Q T G Q C E C R p.940
. . . | 21 . . . g.419568
GCCAACGTTCAGGGTCAGAGATGTGACAAATGCAAG | GCTGGGACCTTTGGCCTACAATCA c.2880
A N V Q G Q R C D K C K | A G T F G L Q S p.960
. . . . . . g.419628
GCAAGGGGCTGTGTTCCCTGCAACTGCAATTCTTTTGGGTCTAAGTCATTCGACTGTGAA c.2940
A R G C V P C N C N S F G S K S F D C E p.980
. . . . . . g.419688
GAGAGTGGACAATGTTGGTGCCAACCTGGAGTCACAGGGAAGAAATGTGACCGCTGTGCC c.3000
E S G Q C W C Q P G V T G K K C D R C A p.1000
. . . | 22. . . g.422618
CACGGCTATTTCAACTTCCAAGAAGGAGGCTGCACAG | CTTGTGAATGTTCTCATCTGGGT c.3060
H G Y F N F Q E G G C T A | C E C S H L G p.1020
. . . . . . g.422678
AATAATTGTGACCCAAAGACTGGGCGATGCATTTGCCCTCCCAATACCATTGGAGAGAAA c.3120
N N C D P K T G R C I C P P N T I G E K p.1040
. . . . . | 23 . g.434726
TGTTCTAAATGTGCACCCAATACCTGGGGCCACAGCATTACCACTGGTTGTAAG | GCTTGT c.3180
C S K C A P N T W G H S I T T G C K | A C p.1060
. . . . . . g.434786
AACTGCAGCACAGTGGGATCCTTGGATTTCCAATGCAATGTAAATACAGGCCAATGCAAC c.3240
N C S T V G S L D F Q C N V N T G Q C N p.1080
. . . . . . g.434846
TGTCATCCAAAATTCTCTGGTGCAAAATGTACAGAGTGCAGTCGAGGTCACTGGAACTAC c.3300
C H P K F S G A K C T E C S R G H W N Y p.1100
. . . . . . g.434906
CCTCGCTGCAATCTCTGTGACTGCTTCCTCCCTGGGACAGATGCCACAACCTGTGATTCA c.3360
P R C N L C D C F L P G T D A T T C D S p.1120
. . . . . | 24 . g.436523
GAGACTAAAAAATGCTCCTGTAGTGATCAAACTGGGCAGTGCACTTGTAAG | GTGAATGTG c.3420
E T K K C S C S D Q T G Q C T C K | V N V p.1140
. . . . . . g.436583
GAAGGCATCCACTGTGACAGATGCCGGCCTGGCAAATTCGGACTCGATGCCAAGAATCCA c.3480
E G I H C D R C R P G K F G L D A K N P p.1160
. . . . . . g.436643
CTTGGCTGCAGCAGCTGCTATTGCTTCGGCACTACTACCCAGTGCTCTGAAGCAAAAGGA c.3540
L G C S S C Y C F G T T T Q C S E A K G p.1180
. | 25 . . . . . g.437380
CTGATCCGGACGTGG | GTGACTCTGAAGGCTGAGCAGACCATTCTACCCCTGGTAGATGAG c.3600
L I R T W | V T L K A E Q T I L P L V D E p.1200
. . . . . . g.437440
GCTCTGCAGCACACGACCACCAAGGGCATTGTTTTTCAACATCCAGAGATTGTTGCCCAC c.3660
A L Q H T T T K G I V F Q H P E I V A H p.1220
. . . . . . g.437500
ATGGACCTGATGAGAGAAGATCTCCATTTGGAACCTTTTTATTGGAAACTTCCAGAACAA c.3720
M D L M R E D L H L E P F Y W K L P E Q p.1240
. | 26 . . . . . g.437666
TTTGAAGGAAAGAAG | TTGATGGCCTATGGGGGCAAACTCAAGTATGCAATCTATTTCGAG c.3780
F E G K K | L M A Y G G K L K Y A I Y F E p.1260
. . . . . . g.437726
GCTCGGGAAGAAACAGGTTTCTCTACATATAATCCTCAAGTGATCATTCGAGGTGGGACA c.3840
A R E E T G F S T Y N P Q V I I R G G T p.1280
. . . . . . g.437786
CCTACTCATGCTAGAATTATCGTCAGGCATATGGCTGCTCCTCTGATTGGCCAATTGACA c.3900
P T H A R I I V R H M A A P L I G Q L T p.1300
. . | 27 . . . . g.437933
AGGCATGAAATTGAAATGACAGAG | AAAGAATGGAAATATTATGGGGATGATCCTCGAGTC c.3960
R H E I E M T E | K E W K Y Y G D D P R V p.1320
. . . . . . g.437993
CATAGAACTGTGACCCGAGAAGACTTCTTGGATATACTATATGATATTCATTACATTCTT c.4020
H R T V T R E D F L D I L Y D I H Y I L p.1340
. . . | 28 . . g.442419
ATCAAAGCTACTTATGGAAATTTCATGCGACAAAGCAG | GATTTCTGAAATCTCAATGGAG c.4080
I K A T Y G N F M R Q S R | I S E I S M E p.1360
. . . . . . g.442479
GTAGCTGAACAAGGACGTGGAACAACAATGACTCCTCCAGCTGACTTGATTGAAAAATGT c.4140
V A E Q G R G T T M T P P A D L I E K C p.1380
. . . | 29 . . . g.450161
GATTGTCCCCTGGGCTATTCTGGCCTGTCCTGTGAG | GCATGCTTGCCGGGATTTTATCGA c.4200
D C P L G Y S G L S C E | A C L P G F Y R p.1400
. . . . . . g.450221
CTGCGTTCTCAACCAGGTGGCCGCACCCCTGGACCAACCCTGGGCACCTGTGTTCCATGT c.4260
L R S Q P G G R T P G P T L G T C V P C p.1420
. . . . . | 30 . g.464211
CAATGTAATGGACACAGCAGCCTGTGTGACCCTGAAACATCGATATGCCAG | AATTGTCAA c.4320
Q C N G H S S L C D P E T S I C Q | N C Q p.1440
. . . . . . g.464271
CATCACACTGCTGGTGACTTCTGTGAACGATGTGCTCTTGGATACTATGGAATTGTCAAG c.4380
H H T A G D F C E R C A L G Y Y G I V K p.1460
. . . . . | 31 . g.471161
GGATTGCCAAATGACTGTCAGCAATGTGCCTGCCCTCTGATTTCTTCCAGTAACAA | TTTC c.4440
G L P N D C Q Q C A C P L I S S S N N | F p.1480
. . . . . . g.471221
AGCCCCTCTTGTGTCGCAGAAGGACTTGACGACTACCGCTGCACGGCTTGTCCACGGGGA c.4500
S P S C V A E G L D D Y R C T A C P R G p.1500
. . | 32 . . . . g.475060
TATGAAGGCCAGTACTGTGAAAG | GTGTGCCCCTGGCTATACTGGCAGTCCAGGCAACCCT c.4560
Y E G Q Y C E R | C A P G Y T G S P G N P p.1520
. | . . . . . g.475120
GGAGGCTCCTGCCAAGAAT | GTGAGTGTGATCCCTATGGCTCACTGCCTGTGCCCTGTGAC c.4620
G G S C Q E C | E C D P Y G S L P V P C D p.1540
alternatively spliced
. . . . . . g.475180
CCTGTCACAGGATTCTGCACGTGCCGACCTGGAGCCACGGGAAGGAAGTGTGACGGCTGC c.4680
P V T G F C T C R P G A T G R K C D G C p.1560
. . . | 33. . . g.488101
AAGCACTGGCATGCACGCGAGGGCTGGGAGTGTGTTT | TTTGTGGAGATGAGTGCACTGGC c.4740
K H W H A R E G W E C V F | C G D E C T G p.1580
. . . . . . g.488161
CTTCTTCTCGGTGACTTGGCTCGCCTGGAGCAGATGGTCATGAGCATCAACCTCACTGGT c.4800
L L L G D L A R L E Q M V M S I N L T G p.1600
. . . . . . g.488221
CCGCTGCCTGCGCCATATAAAATGCTGTATGGTCTTGAAAATATGACTCAGGAGCTAAAG c.4860
P L P A P Y K M L Y G L E N M T Q E L K p.1620
| 34 . . . . . . g.491811
| CACTTGCTGTCACCTCAGCGGGCCCCAGAGAGGCTTATTCAGCTGGCAGAGGGCAATCTG c.4920
| H L L S P Q R A P E R L I Q L A E G N L p.1640
. . . | 35 . . g.505002
AATACACTCGTGACCGAAATGAACGAGCTGCTGACCAGG | GCTACCAAAGTGACAGCAGAT c.4980
N T L V T E M N E L L T R | A T K V T A D p.1660
. . . . . . g.505062
GGCGAGCAGACCGGACAGGATGCTGAGAGGACCAACACAAGAGCAAAGTCCCTGGGAGAA c.5040
G E Q T G Q D A E R T N T R A K S L G E p.1680
. . . | 36 . . . g.513379
TTCATTAAGGAGCTTGCCCGGGATGCAGAAG | CTGTAAATGAAAAAGCTATAAAACTAAAT c.5100
F I K E L A R D A E A | V N E K A I K L N p.1700
. . . . . . g.513439
GAAACTCTAGGAACTCGAGACGAGGCCTTTGAGAGAAATTTGGAAGGGCTTCAGAAAGAG c.5160
E T L G T R D E A F E R N L E G L Q K E p.1720
. . . . . . g.513499
ATTGACCAGATGATTAAAGAACTGAGGAGGAAAAATCTAGAGACACAAAAGGAAATTGCT c.5220
I D Q M I K E L R R K N L E T Q K E I A p.1740
. | 37 . . . . . g.514950
GAAGATGAGTTGGT | AGCTGCAGAAGCCCTTCTGAAAAAAGTGAAGAAGCTGTTTGGAGAG c.5280
E D E L V | A A E A L L K K V K K L F G E p.1760
. . . . . . g.515010
TCCCGGGGGGAAAATGAAGAAATGGAGAAGGATCTCCGGGAAAAACTGGCTGACTACAAA c.5340
S R G E N E E M E K D L R E K L A D Y K p.1780
. . . . . . g.515070
AACAAAGTTGATGATGCTTGGGACCTTTTGAGAGAAGCCACAGATAAAATCAGAGAAGCT c.5400
N K V D D A W D L L R E A T D K I R E A p.1800
. . . . | 38 . . g.523098
AATCGCCTATTTGCAGTAAATCAGAAAAACATGACTGCATTGGAG | AAAAAGAAGGAGGCT c.5460
N R L F A V N Q K N M T A L E | K K K E A p.1820
. . . . . . g.523158
GTTGAAAGCGGCAAACGACAAATTGAGAACACTTTAAAAGAGGGCAATGACATACTCGAT c.5520
V E S G K R Q I E N T L K E G N D I L D p.1840
. . . . | 39 . . g.524201
GAAGCCAACCGTCTTGCAGATGAAATCAACTCCATCATAGAC | TATGTTGAAGACATCCAA c.5580
E A N R L A D E I N S I I D | Y V E D I Q p.1860
. . . . . . g.524261
ACTAAATTGCCACCTATGTCTGAGGAGCTTAATGATAAAATAGATGACCTCTCCCAAGAA c.5640
T K L P P M S E E L N D K I D D L S Q E p.1880
. . . . . . g.524321
ATAAAGGACAGGAAGCTTGCTGAGAAGGTGTCCCAGGCTGAGAGCCACGCAGCTCAGTTG c.5700
I K D R K L A E K V S Q A E S H A A Q L p.1900
. . | 40 . . . . g.525714
AATGACTCATCTGCTGTCCTTGATGG | AATCCTTGATGAGGCTAAAAACATCTCCTTCAAT c.5760
N D S S A V L D G | I L D E A K N I S F N p.1920
. . . . . . g.525774
GCCACTGCAGCCTTCAAAGCTTACAGCAATATTAAGGACTATATTGATGAAGCTGAGAAA c.5820
A T A A F K A Y S N I K D Y I D E A E K p.1940
. . . . | 41 . . g.549626
GTTGCCAAAGAAGCCAAAGATCTTGCACATGAAGCTACAAAACTG | GCAACAGGTCCTCGG c.5880
V A K E A K D L A H E A T K L | A T G P R p.1960
. . . . . . g.549686
GGTTTATTAAAGGAAGATGCCAAAGGCTGTCTTCAGAAAAGCTTCAGGATTCTTAACGAA c.5940
G L L K E D A K G C L Q K S F R I L N E p.1980
. . | 42 . . . g.560537
GCCAAGAAGTTAGCAAATGATGTAAAAG | AAAATGAAGACCATCTAAATGGCTTAAAAACC c.6000
A K K L A N D V K E | N E D H L N G L K T p.2000
. . . . . . g.560597
AGGATAGAAAATGCTGATGCTAGAAATGGGGATCTCTTGAGAACTTTGAATGACACTTTG c.6060
R I E N A D A R N G D L L R T L N D T L p.2020
. . | 43 . . . . g.562710
GGAAAGTTATCAGCTATTCCAAATG | ATACAGCTGCTAAACTGCAAGCTGTTAAGGACAAA c.6120
G K L S A I P N D | T A A K L Q A V K D K p.2040
. . . . . . g.562770
GCCAGACAAGCCAACGACACAGCTAAAGATGTACTGGCACAGATTACAGAGCTCCACCAG c.6180
A R Q A N D T A K D V L A Q I T E L H Q p.2060
. . . . . . g.562830
AACCTCGATGGCCTGAAGAAGAATTACAATAAACTAGCAGACAGCGTCGCCAAAACGAAT c.6240
N L D G L K K N Y N K L A D S V A K T N p.2080
. . | 44 | 45 . . . g.567552
GCTGTGGTTAAAGATCCTTCCAAGAACA | AAATCA | TTGCCGATGCAGATGCCACTGTCAAA c.6300
A V V K D P S K N K | I I | A D A D A T V K p.2100
. . . . . . g.567612
AATTTAGAACAGGAAGCTGACCGGCTAATAGATAAACTCAAACCCATCAAGGAACTTGAG c.6360
N L E Q E A D R L I D K L K P I K E L E p.2120
. . . . . . g.567672
GATAACCTAAAGAAAAACATCTCTGAGATAAAGGAATTGATAAACCAAGCTCGGAAACAA c.6420
D N L K K N I S E I K E L I N Q A R K Q p.2140
| 46 . . . . . g.574898
GCCAATTCT | ATCAAAGTATCTGTGTCTTCAGGAGGTGACTGCATTCGAACATACAAACCA c.6480
A N S | I K V S V S S G G D C I R T Y K P p.2160
. . . . . . g.574958
GAAATCAAGAAAGGAAGTTACAATAATATTGTTGTCAACGTAAAGACAGCTGTTGCTGAT c.6540
E I K K G S Y N N I V V N V K T A V A D p.2180
. . . | 47 . . . g.576041
AACCTCCTCTTTTATCTTGGAAGTGCCAAATTT | ATTGACTTTCTGGCTATAGAAATGCGT c.6600
N L L F Y L G S A K F | I D F L A I E M R p.2200
. . . . . . g.576101
AAAGGCAAAGTCAGCTTCCTCTGGGATGTTGGATCTGGAGTTGGACGTGTAGAGTACCCA c.6660
K G K V S F L W D V G S G V G R V E Y P p.2220
. . . . | 48. . g.578207
GATTTGACTATTGATGACTCATATTGGTACCGTATCGTAGCATCAAG | AACTGGGAGAAAT c.6720
D L T I D D S Y W Y R I V A S R | T G R N p.2240
. . . . . . g.578267
GGAACTATTTCTGTGAGAGCCCTGGATGGACCCAAAGCCAGCATTGTGCCCAGCACACAC c.6780
G T I S V R A L D G P K A S I V P S T H p.2260
. . . . . . g.578327
CATTCGACGTCTCCTCCAGGGTACACGATTCTAGATGTGGATGCAAATGCAATGCTGTTT c.6840
H S T S P P G Y T I L D V D A N A M L F p.2280
. . | 49. . . . g.582092
GTTGGTGGCCTGACTGGGAAATTAAAG | AAGGCTGATGCTGTACGTGTGATTACATTCACT c.6900
V G G L T G K L K | K A D A V R V I T F T p.2300
. . . . . . g.582152
GGCTGCATGGGAGAAACATACTTTGACAACAAACCTATAGGTTTGTGGAATTTCCGAGAA c.6960
G C M G E T Y F D N K P I G L W N F R E p.2320
. . . | 50 . . . g.586177
AAAGAAGGTGACTGCAAAGGATGCACTGTCAG | TCCTCAGGTGGAAGATAGTGAGGGGACT c.7020
K E G D C K G C T V S | P Q V E D S E G T p.2340
. . . . . . g.586237
ATTCAATTTGATGGAGAAGGTTATGCATTGGTCAGCCGTCCCATTCGCTGGTACCCCAAC c.7080
I Q F D G E G Y A L V S R P I R W Y P N p.2360
. . . . . . g.586297
ATCTCCACTGTCATGTTCAAGTTCAGAACATTTTCTTCGAGTGCTCTTCTGATGTATCTT c.7140
I S T V M F K F R T F S S S A L L M Y L p.2380
. | 51 . . . . . g.587049
GCCACACGAGACCTG | AGAGATTTCATGAGTGTGGAGCTCACTGATGGGCACATAAAAGTC c.7200
A T R D L | R D F M S V E L T D G H I K V p.2400
. . . . . . g.587109
AGTTACGATCTGGGCTCAGGAATGGCTTCCGTTGTCAGCAATCAAAACCATAATGATGGG c.7260
S Y D L G S G M A S V V S N Q N H N D G p.2420
. . . . | 52 . . g.595093
AAATGGAAATCATTCACTCTGTCAAGAATTCAAAAACAAG | CCAATATATCAATTGTAGAT c.7320
K W K S F T L S R I Q K Q A | N I S I V D p.2440
. . . . . . g.595153
ATAGATACTAATCAGGAGGAGAATATAGCAACTTCGTCTTCTGGAAACAACTTTGGTCTT c.7380
I D T N Q E E N I A T S S S G N N F G L p.2460
. . . . . | 53 g.597250
GACTTGAAAGCAGATGACAAAATATATTTTGGTGGCCTGCCAACGCTGAGAAACTTGAG | T c.7440
D L K A D D K I Y F G G L P T L R N L S | p.2480
alternatively spliced
. | 54 . . . . . g.600601
ATGAAAGCAAG | GCCAGAAGTAAATCTGAAGAAATATTCCGGCTGCCTCAAAGATATTGAA c.7500
M K A R | P E V N L K K Y S G C L K D I E p.2500
. . . . . . g.600661
ATTTCAAGAACTCCGTACAATATACTCAGTAGTCCCGATTATGTTGGTGTTACCAAAGGA c.7560
I S R T P Y N I L S S P D Y V G V T K G p.2520
. | 55 . . . . . g.603170
TGTTCCCTGGAG | AATGTTTACACAGTTAGCTTTCCTAAGCCTGGTTTTGTGGAGCTCTCC c.7620
C S L E | N V Y T V S F P K P G F V E L S p.2540
. . . . . . g.603230
CCTGTGCCAATTGATGTAGGAACAGAAATCAACCTGTCATTCAGCACCAAGAATGAGTCC c.7680
P V P I D V G T E I N L S F S T K N E S p.2560
. . . . . . g.603290
GGCATCATTCTTTTGGGAAGTGGAGGGACACCAGCACCACCTAGGAGAAAACGAAGGCAG c.7740
G I I L L G S G G T P A P P R R K R R Q p.2580
| 56 . . . . . g.608384
ACTGGACAG | GCCTATTATGTAATACTCCTCAACAGGGGCCGTCTGGAAGTGCATCTCTCC c.7800
T G Q | A Y Y V I L L N R G R L E V H L S p.2600
. . . . . . g.608444
ACAGGGGCACGAACAATGAGGAAAATTGTGATCAGACCAGAGCCGAATCTGTTTCATGAT c.7860
T G A R T M R K I V I R P E P N L F H D p.2620
. . . | 57 . . g.613782
GGAAGAGAACATTCCGTTCATGTAGAGCGAACTAGAGG | CATCTTTACAGTTCAAGTGGAT c.7920
G R E H S V H V E R T R G | I F T V Q V D p.2640
. . . . . . g.613842
GAAAACAGAAGATACATGCAAAACCTGACAGTTGAACAGCCTATCGAAGTTAAAAAGCTT c.7980
E N R R Y M Q N L T V E Q P I E V K K L p.2660
. . . . . . g.613902
TTCGTTGGGGGTGCTCCACCTGAATTTCAACCTTCCCCACTCAGAAATATTCCTCCTTTT c.8040
F V G G A P P E F Q P S P L R N I P P F p.2680
. . . | 58 . . . g.614199
GAAGGCTGCATATGGAATCTTGTTATTAACTCTGT | CCCCATGGACTTTGCAAGGCCTGTG c.8100
E G C I W N L V I N S V | P M D F A R P V p.2700
. . . . . . g.614259
TCCTTCAAAAATGCTGACATTGGTCGCTGTGCCCATCAGAAACTCCGTGAAGATGAAGAT c.8160
S F K N A D I G R C A H Q K L R E D E D p.2720
. . . . . . g.614319
GGAGCAGCTCCAGCTGAAATAGTTATCCAGCCTGAGCCAGTTCCCACCCCAGCCTTTCCT c.8220
G A A P A E I V I Q P E P V P T P A F P p.2740
. . | 59 . . . . g.624554
ACGCCCACCCCAGTTCTGACACAT | GGTCCTTGTGCTGCAGAATCAGAACCAGCTCTTTTG c.8280
T P T P V L T H | G P C A A E S E P A L L p.2760
. . . . . . g.624614
ATAGGGAGCAAGCAGTTCGGGCTTTCAAGAAACAGTCACATTGCAATTGCATTTGATGAC c.8340
I G S K Q F G L S R N S H I A I A F D D p.2780
. | 60. . . . . g.624993
ACCAAAGTTAAAAACCG | TCTCACAATTGAGTTGGAAGTAAGAACCGAAGCTGAATCCGGC c.8400
T K V K N R | L T I E L E V R T E A E S G p.2800
. . . . . . g.625053
TTGCTTTTTTACATGGCTCGCATCAATCATGCTGATTTTGCAACAGTTCAGCTGAGAAAT c.8460
L L F Y M A R I N H A D F A T V Q L R N p.2820
. . . . . . g.625113
GGATTGCCCTACTTCAGCTATGACTTGGGGAGTGGGGACACCCACACCATGATCCCCACC c.8520
G L P Y F S Y D L G S G D T H T M I P T p.2840
. . | 61. . . . g.627092
AAAATCAATGATGGCCAGTGGCACAAG | ATTAAGATAATGAGAAGTAAGCAAGAAGGAATT c.8580
K I N D G Q W H K | I K I M R S K Q E G I p.2860
. . . . . . g.627152
CTTTATGTAGATGGGGCTTCCAACAGAACCATCAGTCCCAAAAAAGCCGACATCCTGGAT c.8640
L Y V D G A S N R T I S P K K A D I L D p.2880
. . . . . . g.627212
GTCGTGGGAATGCTGTATGTTGGTGGGTTACCCATCAACTACACTACCCGAAGAATTGGT c.8700
V V G M L Y V G G L P I N Y T T R R I G p.2900
| 62 . . . . . . g.629405
CCA | GTGACCTATAGCATTGATGGCTGCGTCAGGAATCTCCACATGGCAGAGGCCCCTGCC c.8760
P | V T Y S I D G C V R N L H M A E A P A p.2920
. . . . . . g.629465
GATCTGGAACAACCCACCTCCAGCTTCCATGTTGGGACATGTTTTGCAAATGCTCAGAGG c.8820
D L E Q P T S S F H V G T C F A N A Q R p.2940
. . . | 63. . . g.634245
GGAACATATTTTGACGGAACCGGTTTTGCCAAAGCAG | TTGGTGGATTCAAAGTGGGATTG c.8880
G T Y F D G T G F A K A V | G G F K V G L p.2960
. . . . . . g.634305
GACCTTCTTGTAGAATTTGAATTCCGCACAACTACAACGACTGGAGTTCTTCTGGGGATC c.8940
D L L V E F E F R T T T T T G V L L G I p.2980
. . . . | 64 . g.636244
AGTAGTCAAAAAATGGATGGAATGGGTATTGAAATGATTGATGAAAAG | TTGATGTTTCAT c.9000
S S Q K M D G M G I E M I D E K | L M F H p.3000
. . . . . . g.636304
GTGGACAATGGTGCGGGCAGATTCACTGCTGTCTATGATGCTGGGGTTCCAGGGCATTTG c.9060
V D N G A G R F T A V Y D A G V P G H L p.3020
. . . . . . g.636364
TGTGATGGACAATGGCATAAAGTCACTGCCAACAAGATCAAACACCGCATTGAGCTCACA c.9120
C D G Q W H K V T A N K I K H R I E L T p.3040
. . . . . . g.636424
GTCGATGGGAACCAGGTGGAAGCCCAAAGCCCAAACCCAGCATCTACATCAGCTGACACA c.9180
V D G N Q V E A Q S P N P A S T S A D T p.3060
. . . | 65 . . . g.638078
AATGACCCTGTGTTTGTTGGAGGCTTCCCAG | ATGACCTCAAGCAGTTTGGCCTAACAACC c.9240
N D P V F V G G F P D | D L K Q F G L T T p.3080
. . . . . . g.638138
AGTATTCCGTTCCGAGGTTGCATCAGATCCCTGAAGCTCACCAAAGGCACAGGCAAGCCA c.9300
S I P F R G C I R S L K L T K G T G K P p.3100
. . . . . . g.638198
CTGGAGGTTAATTTTGCCAAGGCCCTGGAACTGAGGGGCGTTCAACCTGTATCATGCCCA c.9360
L E V N F A K A L E L R G V Q P V S C P p.3120
g.638207
GCCAACTAA c.9369
A N X p.3122
. . . . . . g.638267
taaaaataagtgtaaccccaggaagagtctgtcaaaacaagtatatcaagtaaaacaaac c.*60
. . . . . . g.638327
aaatatattttacctatatatgttaattaaactaatttgtgcatgtacatagaattcttt c.*120
. . . . . . g.638387
ctgtattcagatggtgctaattcagactccagactgaattttaattcaagttctttctca c.*180
. . . g.638426
agtctataaataatattaaactgattatttcattctaaa c.*219
(downstream sequence)
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