LOVD - Variant listings for SMN1

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Patient data (#0000885)
Phenotype SMA-3
Phenotype additional -
Reference JdD
Remarks -
Geographic origin Germany
Ethnic origin -
Gender ?
Inheritance familial
Consanguinity -
Fam_Pat -
# reported 2
CK level -
Protein data -
Submitter Johan den Dunnen

Variant data
Allele Maternal (confirmed)
Reported pathogenicity Pathogenic
Concluded pathogenicity Unknown
Exon 7
Genet_ori germline (inherited)
DNA change c.821C>T   (View in UCSC Genome Browser, Ensembl)
Var_pub_as 854C>T
RNA change r.(?)
Protein change p.(Thr274Ile)
DB-ID SMN1_00022
Variant remarks haplotype shared with other German family
Reference Hahnen 1997, (OMIM 0002)
Template DNA
Technique SEQ
Frequency -
RE-site -

2 entries in SMN1

Path.
Allele Descending
Ascending
Exon Descending
Ascending
Genet_ori Descending
Ascending
DNA change Descending
Ascending
Var_pub_as Descending
Ascending
RNA change Descending
Ascending
Protein change Descending
Ascending
DB-ID Descending
Ascending
Variant remarks Descending
Ascending
Reference Descending
Ascending
Template Descending
Ascending
Technique Descending
Ascending
Frequency Descending
Ascending
RE-site Descending
Ascending
+/? Paternal (confirmed) - germline (inherited) c.(?_-163)_(*575_?)del - r.0 p.(0) SMN1_00036 - Hahnen 1997 DNA SEQ - -
+/? Maternal (confirmed) 7 germline (inherited) c.821C>T 854C>T r.(?) p.(Thr274Ile) SMN1_00022 haplotype shared with other German family Hahnen 1997, (OMIM 0002) DNA SEQ - -