LOVD - Variant listings for POMGNT1

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Patient data (#0012085)
Phenotype LIS-II
Phenotype additional -
Reference JdD
Remarks aborted fetus
Geographic origin (France)
Ethnic origin -
Gender -
Inheritance unknown
Consanguinity -
Fam_Pat -
# reported 1
CK level -
Protein data -
Submitter Johan den Dunnen

Variant data
Allele Parent #1
Reported pathogenicity Pathogenic
Concluded pathogenicity Unknown
Exon 17i
DNA change c.1539+1G>A   (View in UCSC Genome Browser, Ensembl)
Var_pub_as -
RNA change r.1414_1539del
Protein change p.Leu472_His513del
DB-ID POMGNT1_00002
Variant remarks -
Genet_ori germline (inherited)
Reference Bouchet 2007
Template DNA, RNA
Technique SEQ
Frequency -
RE-site -

2 entries in POMGNT1

Path.
Allele Descending
Ascending
Exon Descending
Ascending
DNA change Descending
Ascending
Var_pub_as Descending
Ascending
RNA change Descending
Ascending
Protein change Descending
Ascending
DB-ID Descending
Ascending
Variant remarks Descending
Ascending
Genet_ori Descending
Ascending
Reference Descending
Ascending
Template Descending
Ascending
Technique Descending
Ascending
Frequency Descending
Ascending
RE-site Descending
Ascending
+/? Parent #2 7 c.630G>T - r.(?) p.(Trp210Cys) POMGNT1_00050 not in 200 control chromosomes germline (inherited) Bouchet 2007 DNA SEQ - -
+/? Parent #1 17i c.1539+1G>A - r.1414_1539del p.Leu472_His513del POMGNT1_00002 - germline (inherited) Bouchet 2007 DNA, RNA SEQ - -