LOVD - Variant listings for PLEC

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+/? 2i c.193+1705_193+1713del
    + c.193+1705_193+1713del
1_9del r.(?) PLEC1f:p.0? PLEC_00001 mapped by linkage, homozygous 3.7 Mb region; not in 342 control chromosomes; founder haplotype germline (inherited) Gundesli 2010 DNA SEQ - - LGMD-2 progressive muscle weakness, deceased JdD 6-generation family, 4 affecteds Turkey - F isolated (sporadic) - - 2 - -
+/? 2i c.193+1705_193+1713del
    + c.193+1705_193+1713del
1_9del r.(?) PLEC1f:p.0? PLEC_00001 mapped by linkage, homozygous 3.7 Mb region; not in 342 control chromosomes; founder haplotype germline (inherited) Gundesli 2010 DNA SEQ - - LGMD-2 progressive muscle weakness, deceased JdD 6-generation family, 4 affecteds Turkey - F isolated (sporadic) - - 2 - -
+/? 2i c.193+1705_193+1713del
    + c.193+1705_193+1713del
1_9del r.(?) PLEC1f:p.0? PLEC_00001 mapped by linkage, homozygous 3.7 Mb region; not in 342 control chromosomes; founder haplotype germline (inherited) Gundesli 2010 DNA SEQ - - LGMD-2 progressive muscle weakness, deceased JdD 6-generation family, 4 affecteds Turkey - F isolated (sporadic) - - 2 - -
+/? 2i c.193+1705_193+1713del
    + c.193+1705_193+1713del
1_9del r.(?) PLEC1f:p.0? PLEC_00001 mapped by linkage, homozygous 3.7 Mb region; not in 342 control chromosomes; founder haplotype germline (inherited) Gundesli 2010 DNA SEQ - - LGMD-2 progressive muscle weakness, deceased JdD 6-generation family, 4 affecteds Turkey - F isolated (sporadic) - - 2 - -
+/? 2i c.193+1705_193+1713del
    + c.193+1705_193+1713del
1_9del r.(?) PLEC1f:p.0? PLEC_00001 mapped by linkage, homozygous 3.7 Mb region; not in 342 control chromosomes; founder haplotype germline (inherited) Gundesli 2010 DNA SEQ - - LGMD-2 early-onset limb-girdle muscle symptoms; 36y-bedridden, near-total muscle atrophy, evident multiple contractures JdD 6-generation family, 4 affecteds Turkey - M isolated (sporadic) - - 2 - -
+/? 2i c.193+1705_193+1713del
    + c.193+1705_193+1713del
1_9del r.(?) PLEC1f:p.0? PLEC_00001 mapped by linkage, homozygous 3.7 Mb region; not in 342 control chromosomes; founder haplotype germline (inherited) Gundesli 2010 DNA SEQ - - LGMD-2 early-onset limb-girdle muscle symptoms; 36y-bedridden, near-total muscle atrophy, evident multiple contractures JdD 6-generation family, 4 affecteds Turkey - M isolated (sporadic) - - 2 - -
+/? 2i c.193+1705_193+1713del
    + c.193+1705_193+1713del
1_9del r.(?) PLEC1f:p.0? PLEC_00001 mapped by linkage, homozygous 3.7 Mb region; not in 342 control chromosomes; founder haplotype; muscle RNA <0.01 germline (inherited) Gundesli 2010 DNA SEQ - - LGMD-2 3y-delayed independent walking, later additional signs of weakness (occasional falls, difficulty climbing stairs); 14y-progressive weakness; 19y-prolonged Gower's sign, generalized muscle weakness, unable to jump, walked with increased lumbar lordosis, no muscle hypertrophy, ECG normal, EMG myopathic; muscle biopsy dystrophic features (variation fiber size, internal nuclei, scattered basophilic/few necrotic fibers, mild endomysial fibrosis JdD 6-generation family, 4 affecteds Turkey - M isolated (sporadic) - - 2 5584 IHC PLEC strong sarcoplasmic, no sarcolemmal staining; IHC LAMA2, DMD, SGCA/B/G/D, DAG normal
+/? 2i c.193+1705_193+1713del
    + c.193+1705_193+1713del
1_9del r.(?) PLEC1f:p.0? PLEC_00001 mapped by linkage, homozygous 3.7 Mb region; not in 342 control chromosomes; founder haplotype; muscle RNA <0.01 germline (inherited) Gundesli 2010 DNA SEQ - - LGMD-2 3y-delayed independent walking, later additional signs of weakness (occasional falls, difficulty climbing stairs); 14y-progressive weakness; 19y-prolonged Gower's sign, generalized muscle weakness, unable to jump, walked with increased lumbar lordosis, no muscle hypertrophy, ECG normal, EMG myopathic; muscle biopsy dystrophic features (variation fiber size, internal nuclei, scattered basophilic/few necrotic fibers, mild endomysial fibrosis JdD 6-generation family, 4 affecteds Turkey - M isolated (sporadic) - - 2 5584 IHC PLEC strong sarcoplasmic, no sarcolemmal staining; IHC LAMA2, DMD, SGCA/B/G/D, DAG normal
+/? 2i c.193+1705_193+1713del
    + c.193+1705_193+1713del
1_9del r.(?) PLEC1f:p.0? PLEC_00001 not in 342 control chromosomes; founder haplotype germline (inherited) Gundesli 2010 DNA SEQ - - LGMD-2 4y-lordotic gait, Gower's sign, normal mental/fine-motor developmental milestones, muscle biopsy dystrophic changes JdD paternal aunt with LGMD Turkey - M isolated (sporadic) - - 2 4159 IHC LAMA2, DMD, SGCA/B/G/D normal
+/? 2i c.193+1705_193+1713del
    + c.193+1705_193+1713del
1_9del r.(?) PLEC1f:p.0? PLEC_00001 not in 342 control chromosomes; founder haplotype germline (inherited) Gundesli 2010 DNA SEQ - - LGMD-2 4y-lordotic gait, Gower's sign, normal mental/fine-motor developmental milestones, muscle biopsy dystrophic changes JdD paternal aunt with LGMD Turkey - M isolated (sporadic) - - 2 4159 IHC LAMA2, DMD, SGCA/B/G/D normal
+/? 2i c.193+1705_193+1713del
    + c.193+1705_193+1713del
1_9del r.(?) PLEC1f:p.0? PLEC_00001 not in 342 control chromosomes; founder haplotype germline (inherited) Gundesli 2010 DNA SEQ - - LGMD-2 5y-weakness early childhood, difficulty climbing stairs, behind peers in running, Gower's sign, muslce not hypertrophic, muscle biopsy dystrophic changes JdD consanguineous parents, 2nd cousins, Turkey - M isolated (sporadic) yes - 2 3704 IHC LAMA2, DMD, SGCA/B/G/D normal
+/? 2i c.193+1705_193+1713del
    + c.193+1705_193+1713del
1_9del r.(?) PLEC1f:p.0? PLEC_00001 not in 342 control chromosomes; founder haplotype germline (inherited) Gundesli 2010 DNA SEQ - - LGMD-2 5y-weakness early childhood, difficulty climbing stairs, behind peers in running, Gower's sign, muslce not hypertrophic, muscle biopsy dystrophic changes JdD consanguineous parents, 2nd cousins, Turkey - M isolated (sporadic) yes - 2 3704 IHC LAMA2, DMD, SGCA/B/G/D normal
-/? 3i c.255+22G>C - r.(?) p.(=) PLEC_00002 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 6 c.459T>C - r.(?) p.(=) PLEC_00003 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 10i c.1027-33C>G 1026+47C>G r.(?) p.(=) PLEC_00004 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 10i c.1027-33C>G - r.(?) p.(=) PLEC_00004 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 12 c.1176T>C - r.(?) p.(=) PLEC_00005 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 12i c.1250+43T>A - r.(?) p.(=) PLEC_00006 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 13i c.1345-15G>A - r.(?) p.(=) PLEC_00007 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 15 c.1592C>T - r.(?) p.(Ala531Val) PLEC_00008 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 16i c.1896+13A>G - r.(?) p.(=) PLEC_00009 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 20i c.2385+13dupG - r.(?) p.(=) PLEC_00010 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 21i c.2538+6C>T - r.(?) p.(=) PLEC_00011 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 24i c.3004+37C>T - r.(?) p.(=) PLEC_00012 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 28 c.3631T>C - r.(?) p.(=) PLEC_00013 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 28 c.3827G>A - r.(?) p.(Arg1276Gln) PLEC_00014 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 28i c.3838-6A>G - r.(?) p.(=) PLEC_00015 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 31 c.4046A>G - r.(?) p.(His1349Arg) PLEC_00016 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 31i c.4126-4A>G - r.(spl?) p.(?) PLEC_00017 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 32 c.4494T>C - r.(?) p.(=) PLEC_00018 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 32 c.4536T>G - r.(?) p.(=) PLEC_00019 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 32 c.4557G>A - r.(?) p.(=) PLEC_00020 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 32 c.4761G>A - r.(?) p.(=) PLEC_00021 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
?/? 32 c.5310G>A - r.(?) p.(=) PLEC_00022 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 32 c.5988T>C - r.(?) p.(=) PLEC_00023 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 32 c.6009G>A - r.(?) p.(=) PLEC_00024 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 32 c.6251C>T - r.(?) p.(Ala2084Val) PLEC_00025 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 32 c.6522G>A - r.(?) p.(=) PLEC_00026 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 32i c.7506+37C>T - r.(?) p.(=) PLEC_00027 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 32i c.7507-35C>T - r.(?) p.(=) PLEC_00028 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 33 c.7662A>C - r.(?) p.(=) PLEC_00029 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 33 c.8041T>C - r.(?) p.(Ser2681Pro) PLEC_00030 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 33 c.8073G>A - r.(?) p.(=) PLEC_00031 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 33 c.8334C>T - r.(?) p.(=) PLEC_00032 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 33 c.8576G>A - r.(?) p.(Arg2859His) PLEC_00033 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 33 c.9154G>A - r.(?) p.(Val3052Ile) PLEC_00034 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 33 c.9858T>A - r.(?) p.(=) PLEC_00035 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 33 c.10693T>C - r.(?) p.(=) PLEC_00036 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 33 c.10746G>A - r.(?) p.(=) PLEC_00037 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 33 c.11208T>C - r.(?) p.(=) PLEC_00038 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 33 c.11709A>G - r.(?) p.(=) PLEC_00039 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 33 c.11967A>G - r.(?) p.(=) PLEC_00040 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 33 c.12894A>G - r.(?) p.(=) PLEC_00041 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 33 c.13542T>C - r.(?) p.(=) PLEC_00042 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
-/? 33 c.*10C>T - r.(?) p.(=) PLEC_00043 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
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Legend: [ PLEC full legend ]
Sequence variations are described basically as recommended by the Ad-Hoc Committee for Mutation Nomenclature (AHCMN), with the recently suggested additions (den Dunnen JT and Antonarakis SE [2000], Hum.Mut. 15:7-12); for a summary see Nomenclature. Coding DNA Reference Sequence, with the first base of the Met-codon counted as position 1.
Path.: Variant affecting function (pathogenicity), in the format Reported/Concluded; '+' indicating the variant affects function, '+?' probably affects function, '-' does not affect function, '-?' probably does not affect function, '?' effect unknown. Exon: number of exon/intron containing variant DNA change: DNA change Var_pub_as: Var_pub_as RNA change: RNA change Protein change: Protein change PLEC DB-ID: DB-ID Variant remarks: Variant remarks Genet_ori: origin of variant; unknown, germline (i.e. inherited), somatic, de novo, from parental disomy (maternal or paternal) or in vitro (cloned) Reference: publication describing the variant submitted, incl. links to OMIM and dbSNP (when available) Template: Template Technique: Technique Frequency: Frequency RE-site: RE-site Phenotype: phenotype of the individual Phenotype additional: detailed phenotypic features of the individual Reference: publication describing the phenotype of the patient Remarks: Remarks Geographic origin: Geographic origin Ethnic origin: Ethnic origin of patient Gender: individual's gender; ? = unknown, - = not applicable, F = female, M = male, rF = raised as female, rM = raised as male Inheritance: indicates the inheritance of the phenotype in the family; unknown, familial (autosomal/X-linked, dominant/ recessive), paternal (Y-linked), maternal (mitochondrial) or isolated (sporadic) Consanguinity: indicates whether the parents are related (consanguineous), not related (non-consanguineous) or whether consanguinity is not known (unknown) Fam_Pat: number of families (total patients); 1 (3) = 1 family with 3 patients. Preferably there is 1 record for each independent family # reported: Number of times this case has been reported CK level: CK level Protein data: Protein data