LOVD - Variant listings for NEB

About this overview [Show]

Patient data (#0014172)
Phenotype NEM-2
Phenotype additional typical; onset in infancy, muscle weakness most pronounced in facial muscles, neck, flexors and proximal muscles of the limbs; no contractures at birth
Reference Wallgren-Pettersson 1998, JdD
Remarks FAM21 (Fam4, 1999), German family, Turkish descent, unaffected parents
Geographic origin Turkey
Ethnic origin -
Gender ?
Inheritance isolated (sporadic)
Consanguinity -
Fam_Pat -
# reported 2
CK level -
Protein data IHC coexpression of slow, fast and fetal myosin isoforms, differences with M176-181 antibody
Submitter Johan den Dunnen

Variant data
Allele Maternal (inferred)
Reported pathogenicity Pathogenic
Concluded pathogenicity Unknown
Exon 154
DNA change c.22584G>C   (View in UCSC Genome Browser, Ensembl)
Var_pub_as ex163 G>C codon 5792
RNA change r.[22444_22548del, 22548_22549ins22548+1_22548+100]
Protein change p.[Val7494_Gln7528del, Gln7528Hisins*12]
DB-ID NEB_00005
Variant remarks not in 200 control chromosomes
Genet_ori germline (inherited)
Reference Pelin 1999, Lehtokari 2006, (OMIM 0006)
Template DNA, RNA
Technique RT-PCR, SEQ, SSCA
Frequency -
RE-site -

2 entries in NEB

Path.
Allele Descending
Ascending
Exon Descending
Ascending
DNA change Descending
Ascending
Var_pub_as Descending
Ascending
RNA change Descending
Ascending
Protein change Descending
Ascending
DB-ID Descending
Ascending
Variant remarks Descending
Ascending
Genet_ori Descending
Ascending
Reference Descending
Ascending
Template Descending
Ascending
Technique Descending
Ascending
Frequency Descending
Ascending
RE-site Descending
Ascending
+/? Maternal (inferred) 154 c.22584G>C ex163 G>C codon 5792 r.[22444_22548del, 22548_22549ins22548+1_22548+100] p.[Val7494_Gln7528del, Gln7528Hisins*12] NEB_00005 not in 200 control chromosomes germline (inherited) Pelin 1999, Lehtokari 2006, (OMIM 0006) DNA, RNA RT-PCR, SEQ, SSCA - -
+/? Paternal (inferred) 154 c.22584G>C ex163 G>C codon 5792 r.[22444_22548del, 22548_22549ins22548+1_22548+100] p.[Val7494_Gln7528del, Gln7528Hisins*12] NEB_00005 not in 200 control chromosomes germline (inherited) Pelin 1999, Lehtokari 2006, (OMIM 0006) DNA, RNA RT-PCR, SEQ, SSCA - -