LOVD - Variant listings for ISCU

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Patient data (#0020090)
Phenotype HML
Phenotype additional -
Reference Kollberg 2009, JdD
Remarks family, 2 affected males
Geographic origin Sweden
Ethnic origin -
Gender M
Inheritance unknown
Consanguinity -
Fam_Pat -
# reported 2
CK level -
Protein data WB ITGA7 reduced
Submitter Johan den Dunnen

Variant data
Allele Parent #1
Reported pathogenicity Pathogenic
Concluded pathogenicity Unknown
Exon 3
Genet_ori germline (inherited)
DNA change c.74G>A   (View in UCSC Genome Browser, Ensembl)
Var_pub_as 149G>A (Gly50Glu)
RNA change r.(?)
Protein change p.(Gly25Glu)
DB-ID ISCU_00002
Variant remarks not in 100 control chromosome
Reference Kollberg 2009, (OMIM 0002)
Template DNA
Technique SEQ
Frequency -
RE-site -

2 entries in ISCU

Path.
Allele Descending
Ascending
Exon Descending
Ascending
Genet_ori Descending
Ascending
DNA change Descending
Ascending
Var_pub_as Descending
Ascending
RNA change Descending
Ascending
Protein change Descending
Ascending
DB-ID Descending
Ascending
Variant remarks Descending
Ascending
Reference Descending
Ascending
Template Descending
Ascending
Technique Descending
Ascending
Frequency Descending
Ascending
RE-site Descending
Ascending
+/? Parent #1 3 germline (inherited) c.74G>A 149G>A (Gly50Glu) r.(?) p.(Gly25Glu) ISCU_00002 not in 100 control chromosome Kollberg 2009, (OMIM 0002) DNA SEQ - -
+/? Parent #2 5i germline (inherited) c.343+382G>C - r.{343_344ins343+390_343+489; 343_344ins343+390_343+475} p.Met115Lysfs*16 ISCU_00001 - Kollberg 2009 DNA SEQ - -