LOVD - Variant listings for GNE

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+/? 1_8 c.(?_-112)_1726+?del
    + c.577C>T
- r.(?) - GNE_00011 >35.7 Kb deletion (exons 1-9); exon 13 not from GNE gene germline (inherited) Del Bo 2003 DNA Southern blot, PCR, SEQ - - inclusion body myopathy, type 2 - JdD 2-generation family, 2 affected females Italy - F unknown - - 2 - -
+/? 1_8 c.(?_-112)_1726+?del
    + c.577C>T
- r.(?) - GNE_00011 >35.7 Kb deletion (exons 1-9); exon 13 not from GNE gene germline (inherited) Del Bo 2003 DNA Southern blot, PCR, SEQ - - inclusion body myopathy, type 2 - JdD 2-generation family, 2 affected females Italy - F unknown - - 1 - -
-/- 1_12 c.=
    + c.889C>T
- r.= p.= GNE_00000 no variants 2nd chromosome germline (inherited) - DNA SEQ - - sialuria moderate developmental delay, hepatosplenomegaly, slightly coarse facial features, large tongue, macrocephaly, massive urinary excretion free sialic acid; 7y-mild intellectual impairment (attends regular school), fine-motor difficulty, growth 10th percentile, organomegaly persistent Wilcken 1987, JdD - Finland - F unknown - - 1 - -
-/- 1_12 c.=
    + c.890G>A
- r.= p.= GNE_00000 no variants 2nd chromosome germline (inherited) - DNA SEQ - - sialuria hepatomegaly, dysmorphic facies, hirsutism, normal growth; 6y-IQ68 Krasnewich 1993, JdD - Finland - - unknown - - 1 - -
-/- 1_12 c.=
    + c.881G>T
- r.= p.= GNE_00000 no variants 2nd chromosome germline (inherited) - DNA SEQ - - sialuria hepatomegaly, coarse voice, facial features; 5y-growth/development normal Weiss 1989, JdD - Finland - M unknown - - 1 - -
-/- 1_12 c.=
    + c.890G>A
- r.= p.= GNE_00000 no variants 2nd chromosome germline (inherited) - DNA SEQ - - sialuria - JdD - Portugal - F unknown - - 1 - -
-/- 1_12 c.=
    + c.890G>A
- r.= p.= GNE_00000 no variants 2nd chromosome germline (inherited) - DNA SEQ - - sialuria - JdD patient and carrier mother (raised urine creatinine) United States - M unknown - - 2 - -
?/? 1_12 c.?
    + c.628C>T
- r.? p.? GNE_00000 unknown variant 2nd chromosome germline (inherited) - DNA SEQ - - inclusion body myopathy - JdD - Italy - - unknown - - 1 - -
?/? 1_12 c.?
    + c.922C>T
- r.? p.? GNE_00000 unknown variant 2nd chromosome germline (inherited) - DNA SEQ - - myopathy, distal, rimmed vacuoles - JdD - France - - unknown - - 1 - -
?/? 1_12 c.?
    + c.2129T>G
- r.? p.? GNE_00000 unknown variant 2nd chromosome germline (inherited) - DNA SEQ - - myopathy, distal, rimmed vacuoles - JdD - France - - unknown - - 1 - -
+/? 2 c.98A>G
    + c.98A>G
A>G (E2G) r.(?) p.(Glu33Gly) GNE_00020 - germline (inherited) Saechao 2010 DNA PCR, SEQ - - inclusion body myopathy, type 2 - Saechao 2010, JdD - United States European F unknown - - 1 - -
+/? 2 c.98A>G
    + c.98A>G
A>G (E2G) r.(?) p.(Glu33Gly) GNE_00020 - germline (inherited) Saechao 2010 DNA PCR, SEQ - - inclusion body myopathy, type 2 - Saechao 2010, JdD - United States European F unknown - - 1 - -
+/? 2 c.115C>T
    + c.1985C>T
C>T (R8X) r.(?) p.(Arg39*) GNE_00012 - germline (inherited) Saechao 2010 DNA PCR, SEQ - - inclusion body myopathy, type 2 - Saechao 2010, JdD - United States Caucasian F unknown - - 1 - -
+/? 2 c.124C>T
    + c.2179G>A
R11W r.(?) p.(Arg42Trp) GNE_00013 not in 100 control chromosomes germline (inherited) Huizing 2004 DNA PCR, SEQ - - inclusion body myopathy, type 2 - JdD - India Asian F unknown - - 1 - -
+/? 2 c.131G>C
    + c.620A>T
89G>C (C13S) r.(?) p.(Cys44Ser) GNE_00014 - germline (inherited) Saito 2004 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - M unknown - - 1 - -
+/? 2 c.131G>C
    + c.1807G>C
C13S r.131g>c p.Cys44Ser GNE_00014 - germline (inherited) Tomimitsu 2004 DNA, RNA RT-PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - M isolated (sporadic) - - 1 1121 -
+/? 2 c.131G>C
    + c.620A>T
C13S r.131g>c p.Cys44Ser GNE_00014 - germline (inherited) Tomimitsu 2004 DNA, RNA RT-PCR, SEQ - - myopathy proximal dominant JdD - Japan - M isolated (sporadic) - - 1 811 -
+/? 2 c.131G>C
    + c.1807G>C
C13S r.(?) p.(Cys44Ser) GNE_00014 - germline (inherited) Kim 2006 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Korea - F unknown - - 1 275 -
+/? 2 c.131G>C
    + c.179T>C
C13S r.(?) p.(Cys44Ser) GNE_00014 - germline (inherited) Kim 2006 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Korea - F unknown - - 1 413 -
+?/? 2 c.146delA
    + c.2179G>A
- r.(?) p.(Asn49Thrfs*33) GNE_00015 - germline (inherited) - DNA PCR, SEQ - - myopathy, distal - United States:Marshfield, WI - Canada - F unknown - - 1 - -
+/? 2 c.172C>T
    + c.172C>T
79C>T (P27S) r.(?) p.(Pro58Ser) GNE_00016 - germline (inherited) Broccolini 2004 DNA PCR, SEQ - - inclusion body myopathy, type 2 - JdD - Italy - F unknown - - 1 - -
+/? 2 c.172C>T
    + c.172C>T
79C>T (P27S) r.(?) p.(Pro58Ser) GNE_00016 - germline (inherited) Broccolini 2004 DNA PCR, SEQ - - inclusion body myopathy, type 2 - JdD - Italy - F unknown - - 1 - -
+/? 2 c.179T>C
    + c.131G>C
M29T r.(?) p.(Met60Thr) GNE_00017 - germline (inherited) Kim 2006 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Korea - F unknown - - 1 413 -
+/? 2 c.188_197dupTTAAAACCGA
    + c.1807G>C
10 bp insertion (fs*) r.(?) Frameshift GNE_00018 - germline (inherited) Nishino 2002 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - - unknown - - 1 - -
+/? 2 c.200C>T
    + c.1763T>C
107C>T (P36L) r.(?) p.(Pro67Leu) GNE_00019 - germline (inherited) Eisenberg 2003 DNA PCR, SEQ - - inclusion body myopathy, type 2 rimmed vacuoles, lobulated fibers JdD - Italy - - unknown - - 2 - -
+/? 3 c.304A>T
    + c.304A>T
A>T (R71W) r.(?) p.(Arg102Trp) GNE_00021 - germline (inherited) Saechao 2010 DNA PCR, SEQ - - inclusion body myopathy, type 2 - Saechao 2010, JdD - United States Caucasian F unknown - - 1 - -
+/? 3 c.304A>T
    + c.304A>T
A>T (R71W) r.(?) p.(Arg102Trp) GNE_00021 - germline (inherited) Saechao 2010 DNA PCR, SEQ - - inclusion body myopathy, type 2 - Saechao 2010, JdD - United States Caucasian F unknown - - 1 - -
+/? 3 c.358G>C
    + c.2179G>A
265G>C (G89R) r.(?) p.(Gly120Arg) GNE_00022 - germline (inherited) Liewluck 2006 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles possible rigid spine during pregnancy, unable to walk independently for 2y JdD affected brother Thailand - F unknown - - 1 - -
+?/? 3 c.478C>T
    + c.2179G>A
- r.(?) p.(Arg160*) GNE_00084 - germline (inherited) - DNA PCR, SEQ - - myopathy, inclusion body slowly progressive distal weakness; EMG myopathic United States:Marshfield, WI - India - M unknown - - 1 mildly elevated -
+/? 3 c.479G>A
    + c.620A>T
R129Q r.479g>a p.Arg160Gln GNE_00023 - germline (inherited) Tomimitsu 2004 DNA, RNA RT-PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - M isolated (sporadic) - - 1 1310 -
+/? 3 c.479G>A
    + c.1807G>C
R129Q r.(?) p.(Arg160Gln) GNE_00023 - germline (inherited) Kim 2006 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Korea - F unknown - - 1 231 -
+/? 3 c.489C>G
    + c.620A>T
447C>G (H132Q) r.(?) p.(His163Gln) GNE_00024 - germline (inherited) Nishino 2002 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - - unknown - - 1 - -
+/? 3 c.497G>T
    + c.829C>T
404G>T (G135V) r.(?) p.(Gly166Val) GNE_00025 - germline (inherited) Darvish 2002 DNA PCR, SEQ - - myopathy, inclusion body, type 2 - Gotlieb 2005, JdD 2-generation family, affected female, unaffected carrier parents; 16112887-Pat29 United States - F familial, autosomal recessive - - 2 - -
+/? 3 c.518T>C
    + c.830G>A
T>C (I142T) r.(?) p.(Ile173Thr) GNE_00026 - germline (inherited) Saechao 2010 DNA PCR, SEQ - - inclusion body myopathy, type 2 - Saechao 2010, JdD - United States Caucasian F unknown - - 1 - -
+/? 3 c.577C>T
    + c.(?_-112)_1726+?del
535C>T (R162C) r.(?) p.(Arg193Cys) GNE_00027 not in 200 control chromosomes germline (inherited) Del Bo 2003 DNA PCR, SEQ - PstI+ inclusion body myopathy, type 2 - JdD 2-generation family, 2 affected females Italy - F unknown - - 2 - -
+/? 3 c.577C>T
    + c.(?_-112)_1726+?del
535C>T (R162C) r.(?) p.(Arg193Cys) GNE_00027 not in 200 control chromosomes germline (inherited) Del Bo 2003 DNA PCR, SEQ - PstI+ inclusion body myopathy, type 2 - JdD 2-generation family, 2 affected females Italy - F unknown - - 1 - -
+/? 3 c.604A>G
    + c.604A>G
562A>G (M171V) r.(?) p.(Met202Val) GNE_00028 - germline (inherited) Broccolini 2002, (OMIM 0016) DNA PCR, SEQ - NlaIII- myopathy, inclusion body, type 1, quadriceps sparing - JdD 4-generation family, 2 affected females Italy - F unknown - - 2 - -
+/? 3 c.604A>G
    + c.604A>G
562A>G (M171V) r.(?) p.(Met202Val) GNE_00028 - germline (inherited) Broccolini 2002, (OMIM 0016) DNA PCR, SEQ - NlaIII- myopathy, inclusion body, type 1, quadriceps sparing - JdD 4-generation family, 2 affected females Italy - F unknown - - 2 - -
+/? 3 c.620A>T
    + c.131G>C
578A>T (D176V) r.(?) p.(Asp207Val) GNE_00029 - germline (inherited) Saito 2004 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - M unknown - - 1 - -
+/? 3 c.620A>T
    + c.1807G>C
D176V r.620a>u p.Asp207Val GNE_00029 - germline (inherited) Tomimitsu 2004 DNA, RNA RT-PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - F isolated (sporadic) - - 1 145 -
+/? 3 c.620A>T
    + c.940C>T
D176V r.620a>u p.Asp207Val GNE_00029 - germline (inherited) Tomimitsu 2004 DNA, RNA RT-PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - F isolated (sporadic) - - 1 248 -
+/? 3 c.620A>T
    + c.479G>A
D176V r.620a>u p.Asp207Val GNE_00029 - germline (inherited) Tomimitsu 2004 DNA, RNA RT-PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - M isolated (sporadic) - - 1 1310 -
+/? 3 c.620A>T
    + c.131G>C
D176V r.620a>u p.Asp207Val GNE_00029 - germline (inherited) Tomimitsu 2004 DNA, RNA RT-PCR, SEQ - - myopathy proximal dominant JdD - Japan - M isolated (sporadic) - - 1 811 -
+/? 3 c.620A>T
    + c.1625C>A
A>T (D176V) r.(?) p.(Asp207Val) GNE_00029 - germline (inherited) Motozaki 2007 DNA PCR, SEQ - - inclusion body myopathy, type 2 - JdD - Japan - M unknown - - 2 2224 -
+/? 3 c.620A>T
    + c.1085T>C
578A>T (D176V) r.(?) p.(Asp207Val) GNE_00029 - germline (inherited) Nishino 2002 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - - unknown - - 1 - -
+/? 3 c.620A>T
    + c.489C>G
578A>T (D176V) r.(?) p.(Asp207Val) GNE_00029 - germline (inherited) Nishino 2002 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - - unknown - - 1 - -
+/? 3 c.620A>T
    + c.1807G>C
578A>T (D176V) r.(?) p.(Asp207Val) GNE_00029 - germline (inherited) Nishino 2002 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - - unknown - - 1 - -
+/? 3 c.620A>T
    + c.1981G>A
578A>T (D176V) r.(?) p.(Asp207Val) GNE_00029 - germline (inherited) Nishino 2002 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - - unknown - - 1 - -
+/? 3 c.620A>T
    + c.1981G>A
578A>T (D176V) r.(?) p.(Asp207Val) GNE_00029 - germline (inherited) Nishino 2002 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - - unknown - - 1 - -
+/? 3 c.620A>T
    + c.1508T>C
578A>T (D176V) r.(?) p.(Asp207Val) GNE_00029 - germline (inherited) Nishino 2002 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - - unknown - - 1 - -
+/? 3 c.620A>T
    + c.620A>T
578A>T (D176V) r.(?) p.(Asp207Val) GNE_00029 - germline (inherited) Nishino 2002 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - - unknown - - 1 - -
+/? 3 c.620A>T
    + c.620A>T
578A>T (D176V) r.(?) p.(Asp207Val) GNE_00029 - germline (inherited) Nishino 2002 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - - unknown - - 1 - -
+/? 3 c.620A>T
    + c.1010G>A
578A>T (D176V) r.(?) p.(Asp207Val) GNE_00029 - germline (inherited) Nishino 2002 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - - unknown - - 1 - -
+/? 3 c.620A>T
    + c.1807G>C
578A>T (D176V) r.(?) p.(Asp207Val) GNE_00029 - germline (inherited) Nishino 2002 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - - unknown - - 1 - -
+/? 3 c.622C>T
    + c.1807G>C
580C>T (R177C) r.(?) p.(Arg208Cys) GNE_00030 - germline (inherited) Nishino 2002 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - - unknown - - 1 - -
+/? 3 c.628C>T
    + c.?
C>T (L179F) r.(?) p.(Leu210Phe) GNE_00031 - germline (inherited) Bruno 2008 DNA PCR, SEQ - - inclusion body myopathy - JdD - Italy - - unknown - - 1 - -
+/? 3 c.628C>T
    + c.1853T>C
535C>T (L179F) r.(?) p.(Leu210Phe) GNE_00031 - germline (inherited) Grandis 2010 DNA PCR, SEQ - - inclusion body myopathy, type 2 - JdD - Italy - M unknown - - 1 - -
+/? 3 c.691A>T
    + c.1225G>T
649A>T (I200F) r.(?) p.(Ile231Phe) GNE_00032 - germline (inherited) Eisenberg 2003 DNA PCR, SEQ - AluI+ inclusion body myopathy, type 2 rimmed vacuoles, inclusion bodies JdD - United States - - unknown - - 2 - -
-/? 3 c.693C>T NM_005476.5:c.600C>T (I200I) r.(?) p.(=) GNE_00085 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
+/? 3 c.698G>T
    + c.1768G>A
R202L r.(?) p.(Arg233Leu) GNE_00033 not in 100 control chromosomes germline (inherited) Huizing 2004 DNA PCR, SEQ - - inclusion body myopathy, type 2 - JdD - Greece - F unknown - - 1 - -
+/? 3 c.705G>A
    + c.1985C>T
G>A (W204X) r.(?) p.(Trp235*) GNE_00034 - germline (inherited) Saechao 2010 DNA PCR, SEQ - - inclusion body myopathy, type 2 - Saechao 2010, JdD - United States Caucasian F unknown - - 1 - -
+/? 3 c.709G>A
    + c.1223delT
616G>A (G206S) r.(?) p.(Gly237Ser) GNE_00036 - germline (inherited) Broccolini 2004 DNA PCR, SEQ - - inclusion body myopathy, type 2 - JdD - Italy - F unknown - - 1 - -
+/? 3 c.709+1delG
    + c.1891G>A
616delG (G206fsX4) r.(spl?) p.(Gly237fs*4) GNE_00035 - germline (inherited) Broccolini 2004 DNA PCR, SEQ - - inclusion body myopathy, type 2 - JdD - Italy - M unknown - - 1 - -
+/? 3 c.709+1delG
    + c.1891G>A
616delG (G206fsX4) r.(spl?) p.(Gly237fs*4) GNE_00035 - germline (inherited) Broccolini 2004 DNA PCR, SEQ - - inclusion body myopathy, type 2 - JdD - Italy - F unknown - - 1 - -
+/? 4 c.709G>A
    + c.1223delT
616G>A (G206S) r.(?) p.(Gly237Ser) GNE_00036 - germline (inherited) Broccolini 2004 DNA PCR, SEQ - - inclusion body myopathy, type 2 - JdD - Italy - F unknown - - 1 - -
+/? 4 c.740T>C
    + c.1985C>T
698T>C (V216A) r.(?) p.(Val247Ala) GNE_00037 not in 36 control chromosomes germline (inherited) Vasconcelos 2002 DNA PCR, SEQ - Fnu4HI+ myopathy, inclusion body, type 1, quadriceps sparing - Gotlieb 2005, JdD 2-generation family, 2 affecteds (F, M) United States Jewish ? familial, autosomal recessive - - 3 - -
+/? 4 c.740T>C
    + c.1985C>T
V216A r.(?) p.(Val247Ala) GNE_00037 - germline (inherited) Huizing 2004 DNA PCR, SEQ - - myopathy, inclusion body, type 1, quadriceps sparing - JdD - United States - F unknown - - 1 - -
+/? 4 c.766G>A
    + c.830G>A
724G>A (D225N) r.(?) p.(Asp256Asn) GNE_00010 not in 132 control chromosomes germline (inherited) Eisenberg 2001, Eisenberg 2003, (OMIM 0011) DNA PCR, SEQ - TspRI- inclusion body myopathy, type 2 - JdD 2-generation family, 4 affecteds (2F, 2M) Bahamas - - isolated (sporadic) - - 5 - -
+/? 4 c.815T>G
    + c.1632G>A
T>G (I241S) r.(?) p.(Ile272Ser) GNE_00038 - germline (inherited) Ro 2005 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD 3-generation family, 2 affecteds China - M isolated (sporadic) - - 2 - -
+/? 4 c.815T>G
    + c.1632G>A
T>G (I241S) r.(?) p.(Ile272Ser) GNE_00038 - germline (inherited) Ro 2005 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD 3-generation family, 2 affecteds China - F isolated (sporadic) - - 1 - -
+/? 4 c.829C>T
    + c.497G>T
736C>T (R246W) r.(?) p.(Arg277Trp) GNE_00039 - germline (inherited) Darvish 2002 DNA PCR, SEQ - - myopathy, inclusion body, type 2 - Gotlieb 2005, JdD 2-generation family, affected female, unaffected carrier parents; 16112887-Pat29 United States - F familial, autosomal recessive - - 2 - -
+/? 4 c.829C>T
    + c.1021G>C
736C>T (R246W) r.(?) p.(Arg277Trp) GNE_00039 - germline (inherited) Stober 2010 DNA PCR, SEQ - - inclusion body myopathy, type 2 - Stober 2010, JdD 2-generation family, 2 affected sisters Italy - F unknown - - 2 - -
+/? 4 c.829C>T
    + c.1021G>C
736C>T (R246W) r.(?) p.(Arg277Trp) GNE_00039 - germline (inherited) Stober 2010 DNA PCR, SEQ - - inclusion body myopathy, type 2 - Stober 2010, JdD 2-generation family, 2 affected sisters Italy - F unknown - - 1 - -
+/? 4 c.830G>A
    + c.766G>A
788G>A (R246Q) r.(?) p.(Arg277Gln) GNE_00009 not in 132 control chromosomes germline (inherited) Eisenberg 2001, Eisenberg 2003, (OMIM 0010) DNA PCR, SEQ - NlaIV- inclusion body myopathy, type 2 - JdD 2-generation family, 4 affecteds (2F, 2M) Bahamas - - isolated (sporadic) - - 5 - -
+/? 4 c.830G>A
    + c.1163+2dupT
737G>A (R246Q) r.(?) p.(Arg277Gln) GNE_00009 - germline (inherited) Broccolini 2004 DNA PCR, SEQ - - inclusion body myopathy, type 2 - JdD - Italy - F unknown - - 1 - -
+/? 4 c.830G>A
    + c.518T>C
G>A (R246Q) r.(?) p.(Arg277Gln) GNE_00009 - germline (inherited) Saechao 2010 DNA PCR, SEQ - - inclusion body myopathy, type 2 - Saechao 2010, JdD - United States Caucasian F unknown - - 1 - -
+/? 4 c.830G>A
    + c.1399C>T
G>A (R246Q) r.(?) p.(Arg277Gln) GNE_00009 - germline (inherited) Saechao 2010 DNA PCR, SEQ - - inclusion body myopathy, type 2 - Saechao 2010, JdD - Taiwan - M unknown - - 1 - -
+/? 4i c.862+4A>G
    + c.1807G>C
IVS4+4A>G r.710_862del p.Asp238_Gly288del GNE_00040 - germline (inherited) Nishino 2002 DNA, RNA RT-PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - - unknown - - 1 - -
+/? 5 c.881G>T
    + c.=
788G>T (R263L) r.881g>u p.Arg294Leu GNE_00003 - germline (inherited) Seppala, (OMIM 0003) DNA, RNA RT-PCR, SEQ - - sialuria hepatomegaly, coarse voice, facial features; 5y-growth/development normal Weiss 1989, JdD - Finland - M unknown - - 1 - -
?/? 5 c.881G>T
    + c.889C>T, c.890G>A, c.1820G>A, c.1985C>T, c.2228T>C
- r.(?) p.(Arg294Leu) GNE_00003 - germline (inherited) dbSNP-rs121908623 DNA SEQ - - - - JdD - - - - unknown - - 1 - -
+/? 5 c.889C>T
    + c.=
796C>T (R266W) r.889c>u p.Arg297Trp GNE_00001 - germline (inherited) Seppala, (OMIM 0001) DNA, RNA RT-PCR, SEQ - - sialuria moderate developmental delay, hepatosplenomegaly, slightly coarse facial features, large tongue, macrocephaly, massive urinary excretion free sialic acid; 7y-mild intellectual impairment (attends regular school), fine-motor difficulty, growth 10th percentile, organomegaly persistent Wilcken 1987, JdD - Finland - F unknown - - 1 - -
?/? 5 c.889C>T
    + c.881G>T, c.890G>A, c.1820G>A, c.1985C>T, c.2228T>C
- r.(?) p.(Arg297Trp) GNE_00001 - germline (inherited) dbSNP-rs121908621 DNA SEQ - - - - JdD - - - - unknown - - 1 - -
+/? 5 c.890G>A
    + c.=
797G>A (R266Q) r.890g>a p.Arg297Gln GNE_00002 - germline (inherited) Seppala, (OMIM 0002) DNA, RNA RT-PCR, SEQ - - sialuria hepatomegaly, dysmorphic facies, hirsutism, normal growth; 6y-IQ68 Krasnewich 1993, JdD - Finland - - unknown - - 1 - -
+/? 5 c.890G>A
    + c.=
797G>A (R266Q) r.890g>a p.Arg297Gln GNE_00002 - germline (inherited) Ferreira 1999 DNA, RNA RT-PCR, SEQ - - sialuria - JdD - Portugal - F unknown - - 1 - -
+/? 5 c.890G>A
    + c.=
797G>A (R266Q) r.890g>a p.Arg297Gln GNE_00002 - germline (inherited) Leroy 2001, (OMIM 0004) DNA, RNA RT-PCR, SEQ - AciI- sialuria - JdD patient and carrier mother (raised urine creatinine) United States - M unknown - - 2 - -
?/? 5 c.890G>A
    + c.881G>T, c.889C>T, c.1820G>A, c.1985C>T, c.2228T>C
- r.(?) p.(Arg297Gln) GNE_00002 - germline (inherited) dbSNP-rs121908622 DNA SEQ - - - - JdD - - - - unknown - - 1 - -
+/? 5 c.922C>T
    + c.?
829C>T (R277C) r.(?) p.(Arg308Cys) GNE_00044 - germline (inherited) Behin 2008 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - France - - unknown - - 1 - -
+/? 5 c.940C>T
    + c.620A>T
P283S r.940c>u p.Pro314Ser GNE_00045 - germline (inherited) Tomimitsu 2004 DNA, RNA RT-PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - F isolated (sporadic) - - 1 248 -
?/? 5 c.976G>A NM_005476.5:c.883G>A (G295S) r.(?) p.(Gly326Ser) GNE_00086 - unknown from website Emory Genetics Lab DNA SEQ - - ? - United States:Emory Lab - (United States) - - unknown - - 1 - -
+/? 5 c.986T>C
    + c.2179G>A
T>C (I298T) r.(?) p.(Ile329Thr) GNE_00046 - germline (inherited) Saechao 2010 DNA PCR, SEQ - - inclusion body myopathy, type 2 - Saechao 2010, JdD - India Asian F unknown - - 1 - -
+/? 5 c.1000_1001delinsGT
    + c.1807G>C
958_959delTGinsGT (C303V) r.(?) p.(Cys334Val) GNE_00041 - germline (inherited) Tomimitsu 2002, Eisenberg 2003, (OMIM 0014) DNA PCR, SEQ - - myopathy, Nonaka moderate proximal weakness L/E, quadriceps involvement, atrophy hand muscles JdD - Japan - M unknown - - 2 - -
+/? 5 c.1000_1001delinsGT
    + c.1807G>C
C303V r.1000_1001delinsgu p.Cys334Val GNE_00041 - germline (inherited) Tomimitsu 2004 DNA, RNA RT-PCR, SEQ - - myopathy, distal, rimmed vacuoles quadriceps weakness JdD - Japan - M familial - - 1 533 -
+/? 5 c.1002T>A
    + c.2179G>A
960T>A (C303X) r.(?) p.(Cys334*) GNE_00008 not in 132 control chromosomes germline (inherited) Eisenberg 2001, Eisenberg 2003, (OMIM 0009) DNA PCR, SEQ - BbvCI+ inclusion body myopathy, type 2 rimmed vacuoles, inclusion bodies JdD 2-generation family, 2 affecteds (F, M) India - - isolated (sporadic) - - 3 - -
+/? 5 c.1002T>A
    + c.2179G>A
C303X r.(?) p.(Cys334*) GNE_00008 - germline (inherited) Huizing 2004 DNA PCR, SEQ - - inclusion body myopathy, type 2 - JdD - India - F unknown - - 1 - -
+/? 5 c.1010G>A
    + c.620A>T
968G>A (R306Q) r.(?) p.(Arg337Gln) GNE_00042 - germline (inherited) Nishino 2002 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - - unknown - - 1 - -
+/? 5 c.1021G>C
    + c.829C>T
928G>C (A310P) r.(?) p.(Ala341Pro) GNE_00043 - germline (inherited) Stober 2010 DNA PCR, SEQ - - inclusion body myopathy, type 2 - Stober 2010, JdD 2-generation family, 2 affected sisters Italy - F unknown - - 2 - -
+/? 5 c.1021G>C
    + c.829C>T
928G>C (A310P) r.(?) p.(Ala341Pro) GNE_00043 - germline (inherited) Stober 2010 DNA PCR, SEQ - - inclusion body myopathy, type 2 - Stober 2010, JdD 2-generation family, 2 affected sisters Italy - F unknown - - 1 - -
+/? 6 c.1085T>C
    + c.620A>T
1043T>C (V331A) r.(?) p.(Val362Ala) GNE_00047 - germline (inherited) Nishino 2002 DNA PCR, SEQ - - myopathy, distal, rimmed vacuoles - JdD - Japan - - unknown - - 1 - -
+/? 6 c.1096C>T
    + c.1132_1135delinsA
C>T (R335W) r.(?) p.(Arg366Trp) GNE_00048 - germline (inherited) Fisher 2006 DNA PCR, SEQ - - myopathy, inclusion body, type 2 - Gotlieb 2005, JdD 16112887-Pat32 United States - F familial, autosomal recessive - - 1 - -
+/? 6 c.1096C>T
    + c.1760T>C
C>T (R335W) r.(?) p.(Arg366Trp) GNE_00048 - germline (inherited) Saechao 2010 DNA PCR, SEQ - - inclusion body myopathy, type 2 - Saechao 2010, JdD - United States Caucasian F unknown - - 1 - -
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Legend: [ GNE full legend ]
Sequence variations are described basically as recommended by the Ad-Hoc Committee for Mutation Nomenclature (AHCMN), with the recently suggested additions (den Dunnen JT and Antonarakis SE [2000], Hum.Mut. 15:7-12); for a summary see Nomenclature. Coding DNA Reference Sequence, with the first base of the Met-codon counted as position 1.
Path.: Variant affecting function (pathogenicity), in the format Reported/Concluded; '+' indicating the variant affects function, '+?' probably affects function, '-' does not affect function, '-?' probably does not affect function, '?' effect unknown. Exon: number of exon/intron containing variant DNA change: DNA change Var_pub_as: Var_pub_as RNA change: RNA change Protein change: Protein change GNE DB-ID: DB-ID Variant remarks: Variant remarks Genet_ori: origin of variant; unknown, germline (i.e. inherited), somatic, de novo, from parental disomy (maternal or paternal) or in vitro (cloned) Reference: publication describing the variant submitted, incl. links to OMIM and dbSNP (when available) Template: Template Technique: Technique Frequency: Frequency RE-site: RE-site Phenotype: phenotype of the individual Phenotype additional: detailed phenotypic features of the individual Reference: publication describing the phenotype of the patient Remarks: Remarks Geographic origin: Geographic origin Ethnic origin: Ethnic origin of patient Gender: individual's gender; ? = unknown, - = not applicable, F = female, M = male, rF = raised as female, rM = raised as male Inheritance: indicates the inheritance of the phenotype in the family; unknown, familial (autosomal/X-linked, dominant/ recessive), paternal (Y-linked), maternal (mitochondrial) or isolated (sporadic) Consanguinity: indicates whether the parents are related (consanguineous), not related (non-consanguineous) or whether consanguinity is not known (unknown) Fam_Pat: number of families (total patients); 1 (3) = 1 family with 3 patients. Preferably there is 1 record for each independent family # reported: Number of times this case has been reported CK level: CK level Protein data: Protein data