LOVD - Variant listings for COL6A3

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Patient data (#0000488)
Phenotype dystrophy, muscular, congenital, Ullrich (UCMD)
Phenotype additional mild
Reference :Newcastle upon Tyne
Remarks -
Geographic origin Turkey
Ethnic origin -
Gender -
Inheritance de novo, in patient, de novo, in patient, de novo, in patient, de novo, in
Consanguinity -
Fam_Pat -
# reported 1
CK level -
Protein data -
Submitter Anne Lampe

Variant data
Allele Parent #2
Reported pathogenicity No known pathogenicity
Concluded pathogenicity Unknown
Exon 40
DNA change c.8780T>C   (View in UCSC Genome Browser, Ensembl)
Var_pub_as C8780T
RNA change r.8780u>c
Protein change p.Met2927Thr
DB-ID COL6A3_00041
Variant remarks -
Genet_ori germline (inherited)
Reference Giusti 2005
Template DNA, RNA
Technique RT-PCR, SEQ, DHPLC
Frequency -
RE-site -

3 entries in COL6A1

Path.
Allele Descending
Ascending
Exon Descending
Ascending
DNA change Descending
Ascending
Var_pub_as Descending
Ascending
RNA change Descending
Ascending
Protein change Descending
Ascending
DB-ID Descending
Ascending
Variant remarks Descending
Ascending
Genet_ori Descending
Ascending
Reference Descending
Ascending
Template Descending
Ascending
Technique Descending
Ascending
Frequency Descending
Ascending
RE-site Descending
Ascending
+/? Parent #1 9 c.850G>A - r.(?) p.(Gly284Arg) COL6A1_00007 protein domain TH germline (inherited) Giusti 2005, (OMIM 0012) DNA, RNA RT-PCR, SEQ, DHPLC - Msp I
-/? Unknown 35 c.2667G>A G2667A r.2667g>a p.= COL6A1_00033 - germline (inherited) Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Unknown 35 c.2796C>T C2796T r.2796c>u p.= COL6A1_00032 - germline (inherited) Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -

12 entries in COL6A2

Path.
Allele Descending
Ascending
Exon Descending
Ascending
DNA change Descending
Ascending
Var_pub_as Descending
Ascending
RNA change Descending
Ascending
Protein change Descending
Ascending
DB-ID Descending
Ascending
Variant remarks Descending
Ascending
Genet_ori Descending
Ascending
Segregation Descending
Ascending
Reference Descending
Ascending
Template Descending
Ascending
Technique Descending
Ascending
Frequency Descending
Ascending
RE-site Descending
Ascending
-/? Parent #2 5 c.777C>G G777C r.777c>g p.= COL6A2_00047 - germline (inherited) - Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Parent #1 5 c.777C>G G777C r.777c>g p.= COL6A2_00047 - germline (inherited) - Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Unknown 14 c.1196A>G A1196G r.1196a>g p.Asn399Ser COL6A2_00033 - germline (inherited) - Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Parent #2 16 c.1353G>C C1353G r.1353g>c p.= COL6A2_00044 - germline (inherited) - Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Parent #1 16 c.1353G>C C1353G r.1353g>c p.= COL6A2_00044 - germline (inherited) - Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Unknown 26 c.2039G>A 2039A>G r.2039g>a p.Arg680His COL6A2_00035 - germline (inherited) - Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Unknown 26 c.2094G>A - r.2094g>a p.= COL6A2_00036 - germline (inherited) - Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Unknown 26 c.2097C>T - r.2097c>u p.= COL6A2_00037 - germline (inherited) - Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Unknown 26 c.2184G>A - r.2184g>a p.= COL6A2_00038 - germline (inherited) - Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Parent #2 28 c.2697G>T 2697T>G r.2697g>u p.= COL6A2_00039 - germline (inherited) - Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Parent #1 28 c.2697G>T 2697T>G r.2697g>u p.= COL6A2_00039 - germline (inherited) - Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Unknown 28 c.*56T>G T3116G r.*56u>g p.= COL6A2_00045 - germline (inherited) - Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -

7 entries in COL6A3

Path.
Allele Descending
Ascending
Exon Descending
Ascending
DNA change Descending
Ascending
Var_pub_as Descending
Ascending
RNA change Descending
Ascending
Protein change Descending
Ascending
DB-ID Descending
Ascending
Variant remarks Descending
Ascending
Genet_ori Descending
Ascending
Reference Descending
Ascending
Template Descending
Ascending
Technique Descending
Ascending
Frequency Descending
Ascending
RE-site Descending
Ascending
-/? Unknown 36 c.7596G>A G7596A r.7596g>a p.= COL6A3_00035 - germline (inherited) Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Unknown 39 c.8491G>C - r.8491g>c p.Asp2831His COL6A3_00040 - germline (inherited) Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Parent #2 40 c.8780T>C C8780T r.8780u>c p.Met2927Thr COL6A3_00041 - germline (inherited) Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Parent #1 40 c.8780T>C C8780T r.8780u>c p.Met2927Thr COL6A3_00041 - germline (inherited) Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Parent #2 40 c.8820G>A A8820G r.8820g>a p.= COL6A3_00042 - germline (inherited) Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Parent #1 40 c.8820G>A A8820G r.8820g>a p.= COL6A3_00042 - germline (inherited) Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Unknown 41 c.9034G>C C9031G r.9034g>c p.Ala3012Pro COL6A3_00045 - germline (inherited) Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -