LOVD - Variant listings for COL6A2

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Patient data (#0000473)
Phenotype dystrophy, muscular, congenital, Ullrich (UCMD)
Phenotype additional -
Reference :Newcastle upon Tyne
Remarks -
Geographic origin Turkey
Ethnic origin -
Gender -
Inheritance isolated (sporadic)
Consanguinity sporadic, consanguineous parents, sporadic, consanguineous parents
Fam_Pat -
# reported 1
CK level -
Protein data -
Submitter Anne Lampe

Variant data
Allele Parent #1
Reported pathogenicity No known pathogenicity
Concluded pathogenicity Unknown
Exon 14
DNA change c.1196A>G   (View in UCSC Genome Browser, Ensembl)
Var_pub_as A1196G
RNA change r.1196a>g
Protein change p.Asn399Ser
DB-ID COL6A2_00033
Variant remarks -
Genet_ori germline (inherited)
Segregation -
Reference Giusti 2005
Template DNA, RNA
Technique RT-PCR, SEQ, DHPLC
Frequency -
RE-site -

2 entries in COL6A1

Path.
Allele Descending
Ascending
Exon Descending
Ascending
DNA change Descending
Ascending
Var_pub_as Descending
Ascending
RNA change Descending
Ascending
Protein change Descending
Ascending
DB-ID Descending
Ascending
Variant remarks Descending
Ascending
Genet_ori Descending
Ascending
Reference Descending
Ascending
Template Descending
Ascending
Technique Descending
Ascending
Frequency Descending
Ascending
RE-site Descending
Ascending
+/? Paternal (confirmed) 31 c.1977C>G - r.[1977C>G, 1957_2066del] p.[Tyr659*, Phe653Serfs*39] COL6A1_00021 protein domain C1 germline (inherited) Giusti 2005, (OMIM 0011) DNA, RNA RT-PCR, SEQ, DHPLC - -
+/? Maternal (confirmed) 31 c.1977C>G - r.[1977C>G, 1957_2066del] p.[Tyr659*, Phe653Serfs*39] COL6A1_00021 protein domain C1 germline (inherited) Giusti 2005, (OMIM 0011) DNA, RNA RT-PCR, SEQ, DHPLC - -

8 entries in COL6A2

Path.
Allele Descending
Ascending
Exon Descending
Ascending
DNA change Descending
Ascending
Var_pub_as Descending
Ascending
RNA change Descending
Ascending
Protein change Descending
Ascending
DB-ID Descending
Ascending
Variant remarks Descending
Ascending
Genet_ori Descending
Ascending
Segregation Descending
Ascending
Reference Descending
Ascending
Template Descending
Ascending
Technique Descending
Ascending
Frequency Descending
Ascending
RE-site Descending
Ascending
-/? Parent #2 14 c.1196A>G A1196G r.1196a>g p.Asn399Ser COL6A2_00033 - germline (inherited) - Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Parent #1 14 c.1196A>G A1196G r.1196a>g p.Asn399Ser COL6A2_00033 - germline (inherited) - Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Parent #2 16 c.1353G>C C1353G r.1353g>c p.= COL6A2_00044 - germline (inherited) - Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Parent #1 16 c.1353G>C C1353G r.1353g>c p.= COL6A2_00044 - germline (inherited) - Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Parent #1 26 c.2039G>A 2039A>G r.2039g>a p.Arg680His COL6A2_00035 - germline (inherited) - Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Parent #2 26 c.2039G>A 2039A>G r.2039g>a p.Arg680His COL6A2_00035 - germline (inherited) - Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Parent #2 28 c.2697G>T 2697T>G r.2697g>u p.= COL6A2_00039 - germline (inherited) - Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Parent #1 28 c.2697G>T 2697T>G r.2697g>u p.= COL6A2_00039 - germline (inherited) - Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -

7 entries in COL6A3

Path.
Allele Descending
Ascending
Exon Descending
Ascending
DNA change Descending
Ascending
Var_pub_as Descending
Ascending
RNA change Descending
Ascending
Protein change Descending
Ascending
DB-ID Descending
Ascending
Variant remarks Descending
Ascending
Genet_ori Descending
Ascending
Reference Descending
Ascending
Template Descending
Ascending
Technique Descending
Ascending
Frequency Descending
Ascending
RE-site Descending
Ascending
-/? Parent #2 28 c.6855G>C - r.6855g>c p.= COL6A3_00030 - germline (inherited) Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Parent #1 28 c.6855G>C - r.6855g>c p.= COL6A3_00030 - germline (inherited) Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Unknown 38 c.7929G>A - r.7929g>a p.= COL6A3_00037 - germline (inherited) Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Parent #2 40 c.8820G>A A8820G r.8820g>a p.= COL6A3_00042 - germline (inherited) Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Parent #1 40 c.8820G>A A8820G r.8820g>a p.= COL6A3_00042 - germline (inherited) Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Parent #2 41 c.9206C>T C9203T (Thr3068Ile) r.9206c>u p.Thr3069Ile COL6A3_00046 - germline (inherited) Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -
-/? Parent #1 41 c.9206C>T C9203T (Thr3068Ile) r.9206c>u p.Thr3069Ile COL6A3_00046 - germline (inherited) Giusti 2005 DNA, RNA RT-PCR, SEQ, DHPLC - -