collagen type VI alpha 3 (COL6A3) - 2554 nt intron 09 reference sequence

Contains an alternative transcription termination site (exon 9b).
(intronic numbering for coding DNA Reference Sequence)
          .         .         .         .         .         .  g.47536
 gtgagatgggggcgtcggaggttctccttggagcattttccatatgaaaaataacaggct  c.4285+60
G  E  M  G  A  S  E  V  L  L  G  A  F  S  I  *                 p.1428+15

         .         .         .         .         .      /     .  g.47596
caaaggccatggtactcataataaattaaattaaaataaaggttgtatgccctta / ccttt  c.4285+120
                                                        /
 alternative transcription termination site (exon 9b)   ^

         .         .         .         .         .         .  g.47656
atggtttttattttgagacagggtctggctctgtcgtccaggctggagtgcagtggcatg  c.4285+180

         .         .         .         .         .         .  g.47716
atcataactcattttaacctctgccttctgggatccagccaacctcccacttcagcctcc  c.4285+240

         .         .         .         .         .         .  g.47776
tcagtagctaggactacaggttcataccaccacgcccggctaattttttgtattttttgt  c.4285+300

         .         .         .         .         .         .  g.47836
ggagacggggtttcaccatgttggccaggctggtctcaagcccctgagctcaagtgatcc  c.4285+360

         .         .         .         .         .         .  g.47896
acctgctgcggcctcccaaagtgctgggattacaggcctgagacaccgcgcccagcacct  c.4285+420

         .         .         .         .         .         .  g.47956
ttatgttcttcatgcccaccagccagaccccaccaggacacacctgcgactgaacaagtt  c.4285+480

         .         .         .         .         .         .  g.48016
gggtctattgctcatggcatccagggagaatgcataccgtggcaaagcatgagggcatct  c.4285+540

         .         .         .         .         .         .  g.48076
ccataggagggtggccggaaggactggggggacttgagctagtggcaggtcattttgtgg  c.4285+600

         .         .         .         .         .         .  g.48136
aaggcttaaagaaatggaactgtggcctggattggatgttgtcaagacgtggaggtgatt  c.4285+660

         .         .         .         .         .         .  g.48196
ctgtagctgtatcttaagtcttacctagaagcaggatggccttggtatagattggtagag  c.4285+720

         .         .         .         .         .         .  g.48256
aagagcagtcactcttattaaccaggacagggagtgtttttgtcctttttgtggtttgca  c.4285+780

         .         .         .         .         .         .  g.48316
ccatgtttttctttttgtctgtgttcagatagggttacaatgtggtctcattttcatctt  c.4285+840

         .         .         .         .         .         .  g.48376
gccccattgtgatcacagagtagccttgtctgttgtgggggtcctgtgagatcatgtgtg  c.4285+900

         .         .         .         .         .         .  g.48436
ctcaacaggagaaccccaaggccatgtgtgctggaccagctccccaatgcgggggctgat  c.4285+960

         .         .         .         .         .         .  g.48496
tctctctttcttaaacagctccatcacaagagctgctcagcttccactatgctgcattta  c.4285+1020

         .         .         .         .         .         .  g.48556
caccgtaaattgcccaattgtgtatgaggcaaagggcaggttgaaatgtgtggagtagca  c.4285+1080

         .         .         .         .         .         .  g.48616
acatacaagtttaataaaatagcatctgaggagtacctaaaattctaactaataggaaaa  c.4285+1140

         .         .         .         .         .         .  g.48676
tgtggctcatctttctcaggatcttttgattaattttattgttaaaaatgcactaggctg  c.4285+1200

         .         .         .         .         .         .  g.48736
ggcgtggtggctcacgcctgtaatcccagcactttgggaggccgaggtgggctgatcatg  c.4285+1260

         .         g.48753
aggccaggagttcgaga  c.4285+1277

--------------------- middle of intron ---------------------
                              g.48754             .           g.48770
                              c.4286-1277  ccagcctggtcaatatg  c.4286-1261

.         .         .         .         .         .           g.48830
gtgaaaccccatctctactcaaaatacaaaaattagctgggtgtggtggcacacacctgt  c.4286-1201

.         .         .         .         .         .           g.48890
agtcccagctactcgggaggctgaggcagatgaatcacttgaacctgggaggcagaggtt  c.4286-1141

.         .         .         .         .         .           g.48950
gcagtgagccgagattgcgccactgcactccagcctgggcgacagagcaagactccatct  c.4286-1081

.         .         .         .         .         .           g.49010
aaaaaaaaaaaaaaaaattaaaccagttatttaatagaattaaatatttttaaaaatgcg  c.4286-1021

.         .         .         .         .         .           g.49070
ctaatgtaaagaaaatgagtcagggtgggtgggggaagctgggcatggcggctcatgcct  c.4286-961

.         .         .         .         .         .           g.49130
ataattctagcactttgggaggctgaggcaggaggatcacttgggcccaggagttcaaga  c.4286-901

.         .         .         .         .         .           g.49190
ccagcctgggcaacacagtgagaccctcatccaaaaaattaaaaaaaaaaattttaatga  c.4286-841

.         .         .         .         .         .           g.49250
aatttaaaaaataaaggcacaggcatggtggttcatgtctgtagttccagctacttggag  c.4286-781

.         .         .         .         .         .           g.49310
gataaggagggaggattgcttgagcctgggaggtcaaggctgcagtgagctgtgactgtg  c.4286-721

.         .         .         .         .         .           g.49370
caactgcactccagcctgggagatagaaagagaccatgtctcagaaaaaaaaaaaagaaa  c.4286-661

.         .         .         .         .         .           g.49430
gaaaaggaaatagaggaataatagtgaaaaataaaaacttcatataaatgctagagatgt  c.4286-601

.         .         .         .         .         .           g.49490
gtgagcaaaaaggaaatacgagggcacaaatgcctggggagcattaatgtgaccccttgg  c.4286-541

.         .         .         .         .         .           g.49550
atatggcactgtgttatacgtaccctgcccccatgggctgagattgcgcagcatgctggg  c.4286-481

.         .         .         .         .         .           g.49610
atggtgttgggctcctcaggggtctcacttgctaagtgatggccttggacaaggcgagaa  c.4286-421

.         .         .         .         .         .           g.49670
cctttggcctcagctgtttctcttcttgtacaacaaagatatagatcccagtggccttgg  c.4286-361

.         .         .         .         .         .           g.49730
tctcttctggtagcaacagttcatgattctgtagattacggtagcccaagattgatttct  c.4286-301

.         .         .         .         .         .           g.49790
aaatgctccttacattttagaaatcagtagtaacccagaccacaatgccaaaatttaaat  c.4286-241

.         .         .         .         .         .           g.49850
agagtaaattcagaaagacacgttttggataacttcaaatatttcaaggagcagaaattg  c.4286-181

.         .         .         .         .         .           g.49910
ttttggtgtaaaaggtccaatttttaacggctaatttcaaaaagcccgagatacaaacaa  c.4286-121

.         .         .         .         .         .           g.49970
cacaggcatcttgggatataatcttaaggttgattaggattatggtgcaaggtgcacacc  c.4286-61

.         .         .         .         .         .           g.50030
aaacctgggtgagggctacttacacactgaatgtttccctttttcttctttgatctgcag  c.4286-1